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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
200.5
nTPM
HPA Brain:
42.1
nTPM
GTEx:
200.5
nTPM
FANTOM5:
44.0
Scaled Tags Per Million
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.1
Sample id
Sample description
nTPM
Amygdala nTPM: 41.9
2695
Female, age 67, right hemisphere
54.7
1987
Female, age 91, left hemisphere
42.8
2814
Male, age 76, right hemisphere
41.2
2514
Male, age 75, right hemisphere
39.0
2517
Female, age 94, left hemisphere
31.6
Basal amygdala nTPM: 30.9
2827
Female, age 67, right hemisphere
41.1
2609
Male, age 75, right hemisphere
36.5
2110
Male, age 80, left hemisphere
33.0
2685
Female, age 94, left hemisphere
28.0
1955
Male, age 76, both hemispheres
24.1
2243
Female, age 91, right hemisphere
22.8
Central amygdala nTPM: 36.3
2826
Female, age 94, left hemisphere
53.4
2515
Male, age 75, right hemisphere
46.7
2239
Male, age 80, left hemisphere
31.8
1905
Male, age 76, both hemispheres
31.6
2701
Female, age 91, right hemisphere
18.0
Corticomedial amygdala nTPM: 32.2
2829
Male, age 80, left hemisphere
49.6
2429
Female, age 94, left hemisphere
34.1
2428
Male, age 75, right hemisphere
32.9
2242
Female, age 91, right hemisphere
29.0
2535
Female, age 67, right hemisphere
25.3
2240
Male, age 76, both hemispheres
22.5
Lateral amygdala nTPM: 42.1
2830
Female, age 67, right hemisphere
61.8
2516
Male, age 75, right hemisphere
43.7
2534
Female, age 94, left hemisphere
42.2
2256
Male, age 80, left hemisphere
40.3
1883
Male, age 76, both hemispheres
38.3
2255
Female, age 91, right hemisphere
26.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
200.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 200.5
Samples: 181
Max nTPM: 661.6
Min nTPM: 65.9
Std nTPM: 77.1
Median nTPM: 188.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
661.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
566.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
509.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
426.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
403.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
396.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
371.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
314.7
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
301.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
300.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
284.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
280.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
278.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
276.8
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
276.7
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
273.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
272.2
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
271.9
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
271.9
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
270.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
268.8
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
266.3
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
266.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
266.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
265.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
264.7
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
261.5
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
260.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
255.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
255.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
254.9
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
254.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
247.6
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
246.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
245.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
243.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
241.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
240.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
237.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
233.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
233.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
233.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
232.9
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
232.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
232.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
231.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
230.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
229.4
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
227.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
227.1
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
223.5
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
221.7
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
220.6
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
219.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
219.5
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
219.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
216.1
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
216.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
215.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
215.7
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
215.3
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
214.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
214.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
214.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
213.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
211.9
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
210.6
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
210.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
210.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
209.7
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
208.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
207.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
207.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
206.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
206.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
206.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
204.5
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
204.4
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
202.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
202.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
202.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
200.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
200.2
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
198.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
198.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
198.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
197.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
192.8
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
190.5
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
190.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
188.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
187.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
187.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
185.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
185.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
185.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
184.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
184.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
183.8
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
183.0
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
182.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
181.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
180.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
180.8
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
180.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
178.8
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
177.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
176.8
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
175.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
173.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
172.2
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
169.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
168.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
168.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
167.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
167.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
165.7
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
164.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
164.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
164.3
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
163.6
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
163.4
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
163.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
163.3
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
162.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
162.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
161.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
161.4
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
161.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
161.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
160.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
158.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
158.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
158.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
156.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
156.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
153.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
152.4
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
151.2
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
150.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
150.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
149.3
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
148.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
148.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
145.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
144.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
144.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
140.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
139.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
138.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
138.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
137.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
137.7
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
136.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
135.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
132.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
131.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
130.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
128.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
127.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
125.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
125.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
124.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
123.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
122.6
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
121.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
119.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
119.0
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
117.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
116.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
115.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
114.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
112.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
107.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
107.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
97.2
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
96.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
90.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
80.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
79.8
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
65.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.