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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:41.2 nTPM
HPA Brain:74.9 nTPM
GTEx:41.2 nTPM
FANTOM5:355.1 Scaled Tags Per Million
Pig:28.7 nTPM
Mouse:9.6 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA056731
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 51.1
2481 Female, age 94, left hemisphere 77.1
2288 Male, age 75, left hemisphere 60.9
2290 Female, age 72, unknown 49.4
1781 Male, age 74, unknown 49.2
1857 Female, age 85, left hemisphere 45.9
2289 Male, age 61, right hemisphere 45.5
2846 Female, age 79, unknown 42.8
1854 Male, age 80, left hemisphere 37.7
Globus pallidus, externus
nTPM: 65.8
2646 Male, age 61, right hemisphere 92.0
1996 Male, age 80, right hemisphere 80.2
2772 Female, age 79, unknown 64.6
2395 Male, age 75, both hemispheres 49.2
2567 Female, age 72, unknown 42.9
Globus pallidus, internus
nTPM: 74.9
2111 Female, age 85, right hemisphere 95.6
2778 Female, age 91, both hemispheres 87.3
1818 Male, age 74, unknown 76.5
2037 Male, age 80, right hemisphere 76.5
2287 Male, age 75, right hemisphere 67.6
2483 Female, age 94, right hemisphere 63.8
2566 Female, age 72, unknown 56.8
Nucleus accumbens
nTPM: 48.5
2391 Female, age 94, left hemisphere 73.8
2286 Male, age 75, left hemisphere 64.7
2698 Female, age 72, unknown 53.9
2732 Male, age 80, right hemisphere 43.5
1806 Female, age 85, left hemisphere 42.8
1783 Male, age 74, unknown 40.5
2824 Male, age 61, right hemisphere 38.6
1856 Female, age 91, right hemisphere 30.6
Nucleus basalis of Meynert
nTPM: 52.3
2569 Male, age 61, both hemispheres 91.0
2393 Male, age 80, right hemisphere 41.0
2821 Male, age 75, both hemispheres 39.6
2484 Female, age 94, left hemisphere 37.7
Nucleus of the diagonal band
nTPM: 21.8
1979 Male, age 74, unknown 28.7
1812 Female, age 91, both hemispheres 27.9
2195 Female, age 85, both hemispheres 18.9
2029 Male, age 61, right hemisphere 18.5
2775 Male, age 80, right hemisphere 15.1
Putamen
nTPM: 38.7
2482 Female, age 94, left hemisphere 55.0
1937 Female, age 91, right hemisphere 45.5
1829 Male, age 74, unknown 40.7
2647 Male, age 75, left hemisphere 34.3
2489 Female, age 72, unknown 32.8
2466 Female, age 79, unknown 32.6
1838 Male, age 80, right hemisphere 29.9
Septal nuclei
nTPM: 27.0
2394 Male, age 61, left hemisphere 41.6
2199 Male, age 80, right hemisphere 35.9
2629 Female, age 94, right hemisphere 25.6
2059 Female, age 85, both hemispheres 25.4
2031 Female, age 72, unknown 22.2
2009 Female, age 91, both hemispheres 22.0
1960 Male, age 74, unknown 16.1
Stria terminalis, bed nucleus
nTPM: 27.4
2201 Male, age 74, unknown 35.0
2486 Female, age 94, both hemispheres 24.6
1974 Female, age 91, both hemispheres 22.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 41.2
Samples: 246

Max nTPM: 219.3
Min nTPM: 6.9
Std nTPM: 32.3
Median nTPM: 31.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 219.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 205.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 180.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 176.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 137.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 135.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 123.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 116.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 114.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 109.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 104.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 99.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 98.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 98.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 98.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 97.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 97.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 96.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 95.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 92.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 88.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 84.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 83.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 82.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 80.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 80.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 79.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 78.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 77.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 74.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 73.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 72.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 71.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 71.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 70.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 70.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 69.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 69.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 68.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 68.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 68.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 64.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 61.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 61.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 60.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 59.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 58.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 57.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 57.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 56.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 56.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 56.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 55.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 54.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 54.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 51.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 49.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 48.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 48.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 47.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 47.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 47.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 47.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 47.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 46.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 46.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 46.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 45.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 43.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 43.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 42.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 42.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 41.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 40.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 40.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 40.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 40.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 39.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 38.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 38.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 37.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 36.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 36.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 35.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 35.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 35.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 35.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 35.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 35.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 35.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 35.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 35.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 34.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 34.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 34.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 34.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 34.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 34.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 33.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 33.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 33.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 32.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 32.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 32.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 31.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 31.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 31.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 31.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 31.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 31.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 31.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 31.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 30.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 30.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 30.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 30.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 30.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 30.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 29.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 29.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 28.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 28.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 28.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 28.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 28.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 28.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 27.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 27.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 27.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 27.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 26.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 26.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 25.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 25.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 25.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 24.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 24.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 24.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 24.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 24.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 24.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 24.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 24.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 24.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 23.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 23.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 23.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 23.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 23.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 23.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 23.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 23.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 22.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 22.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 22.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 22.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 22.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 21.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 21.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 21.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 21.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 21.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 21.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 20.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 20.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 20.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 20.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 20.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 20.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 20.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 20.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 20.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 20.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 19.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 19.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 19.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 19.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 19.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 19.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 19.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 19.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 19.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 19.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 19.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 18.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 18.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 18.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 18.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 18.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 18.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 18.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 18.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 18.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 17.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 17.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 17.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 17.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 17.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 17.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 17.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 17.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 16.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 16.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 16.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 16.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 16.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 16.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 16.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 16.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 15.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 15.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 15.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 15.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 15.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 15.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 15.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 14.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 14.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 14.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 14.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 14.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 14.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 13.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 13.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 12.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 12.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 12.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 11.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 11.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 11.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 10.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 10.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 10.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 6.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 30.5
Samples: 246

Max nTPM: 120.3
Min nTPM: 5.6
Std nTPM: 21.7
Median nTPM: 23.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 120.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 110.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 108.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 103.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 99.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 97.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 96.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 86.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 85.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 79.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 79.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 76.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 75.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 74.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 73.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 73.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 72.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 72.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 70.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 69.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 69.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 68.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 67.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 63.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 60.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 59.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 59.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 58.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 56.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 56.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 55.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 54.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 53.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 52.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 51.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 51.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 51.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 50.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 50.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 47.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 47.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 46.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 45.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 44.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 44.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 44.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 43.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 43.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 43.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 42.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 42.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 42.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 41.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 40.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 39.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 39.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 39.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 39.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 38.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 38.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 38.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 38.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 37.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 37.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 37.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 37.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 36.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 35.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 34.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 34.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 34.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 34.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 34.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 33.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 33.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 33.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 33.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 32.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 32.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 32.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 31.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 31.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 31.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 31.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 31.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 30.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 30.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 29.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 29.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 28.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 28.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 27.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 27.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 27.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 27.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 27.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 27.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 26.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 26.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 26.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 26.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 26.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 25.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 25.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 25.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 25.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 25.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 24.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 24.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 24.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 24.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 24.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 24.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 24.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 23.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 23.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 23.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 23.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 23.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 23.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 23.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 23.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 23.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 22.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 22.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 22.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 22.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 22.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 21.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 21.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 21.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 21.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 21.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 21.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 21.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 20.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 20.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 20.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 20.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 20.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 20.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 20.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 20.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 19.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 19.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 19.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 19.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 19.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 19.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 19.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 19.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 19.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 19.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 18.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 18.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 18.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 18.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 18.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 18.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 18.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 18.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 18.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 18.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 17.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 17.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 17.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 17.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 17.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 17.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 17.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 16.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 16.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 16.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 16.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 16.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 16.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 16.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 16.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 16.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 16.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 15.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 15.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 15.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 15.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 15.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 15.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 14.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 14.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 14.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 14.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 14.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 14.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 14.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 14.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 14.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 14.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 14.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 14.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 14.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 14.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 14.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 13.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 13.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 13.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 13.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 13.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 13.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 13.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 13.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 13.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 13.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 13.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 13.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 12.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 12.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 12.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 12.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 12.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 12.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 12.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 12.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 11.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 11.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 11.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 11.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 11.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 11.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 11.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 11.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 10.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 10.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 10.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 10.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 9.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 9.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 9.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 8.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 8.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 8.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 7.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 7.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 7.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 6.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 6.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 5.6
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Brain - Putamen (basal ganglia)
Average nTPM: 36.5
Samples: 205

Max nTPM: 194.5
Min nTPM: 7.0
Std nTPM: 29.0
Median nTPM: 26.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 194.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 169.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 151.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 135.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 133.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 133.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 104.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 100.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 99.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 96.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 91.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 87.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 84.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 83.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 80.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 79.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 79.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 78.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 77.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 77.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 72.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 71.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 70.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 68.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 68.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 65.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 65.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 61.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 60.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 59.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 56.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 56.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 54.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 54.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 52.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 52.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 51.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 51.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 51.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 51.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 49.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 48.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 48.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 47.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 45.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 45.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 44.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 44.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 44.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 43.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 42.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 42.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 41.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 40.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 39.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 39.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 39.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 38.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 38.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 37.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 36.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 36.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 35.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 35.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 34.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 34.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 34.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 34.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 33.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 32.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 32.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 32.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 32.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 31.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 31.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 31.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 30.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 30.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 30.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 30.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 29.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 29.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 28.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 28.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 28.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 28.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 27.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 27.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 27.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 27.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 27.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 27.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 27.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 27.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 27.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 26.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 26.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 26.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 26.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 26.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 26.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 26.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 26.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 25.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 25.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 25.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 24.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 24.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 24.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 24.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 24.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 24.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 24.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 23.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 23.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 23.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 23.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 23.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 23.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 23.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 23.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 22.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 22.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 22.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 22.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 22.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 22.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 22.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 22.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 22.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 21.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 21.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 21.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 21.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 21.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 21.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 21.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 21.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 21.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 20.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 20.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 20.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 20.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 19.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 19.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 19.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 19.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 18.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 18.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 18.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 18.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 17.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 17.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 17.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 17.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 17.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 17.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 17.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 16.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 16.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 16.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 16.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 15.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 15.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 15.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 15.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 15.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 15.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 14.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 14.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 14.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 14.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 14.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 14.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 14.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 14.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 14.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 14.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 13.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 13.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 13.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 13.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 13.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 13.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 13.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 13.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 12.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 12.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 12.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 11.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 11.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 11.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 11.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 10.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 10.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 9.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 9.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 7.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

355.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 262.8
FF:10164-103B2 76 years, female 262.8
Nucleus accumbens
Scaled Tags Per Million: 108.5
FF:10037-101F1 23-56 years, mixed 108.5
Putamen
Scaled Tags Per Million: 160.1
FF:10176-103C5 60 years, female 160.1
Globus pallidus
Scaled Tags Per Million: 355.1
FF:10161-103A8 76 years, female 494.5
FF:10175-103C4 60 years, female 215.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.7
Pig sample Sample description nTPM
Caudate
nTPM: 23.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 20.8
Sample A Female 22.9
Sample B Female 23.2
Sample C Male 25.5
Sample D Male 20.8
Putamen
nTPM: 27.0
Samples: 4

Max nTPM: 33.5
Min nTPM: 21.6
Sample A Female 33.5
Sample B Female 24.7
Sample C Male 21.6
Sample D Male 28.3
Septum
nTPM: 28.7
Samples: 4

Max nTPM: 34.5
Min nTPM: 19.0
Sample A Female 19.0
Sample B Female 27.8
Sample C Male 34.5
Sample D Male 33.6
Ventral pallidum
nTPM: 26.2
Samples: 4

Max nTPM: 30.9
Min nTPM: 17.2
Sample A Female 17.2
Sample B Female 26.4
Sample C Male 30.4
Sample D Male 30.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 9.6
Samples: 4

Max nTPM: 11.3
Min nTPM: 7.8
Sample A Male 9.0
Sample B Male 7.8
Sample C Female 10.3
Sample D Female 11.3
Septum
nTPM: 8.8
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.6
Sample A Male 7.6
Sample B Male 9.2
Sample C Female 8.9
Sample D Female 9.6
Ventral forebrain
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.6
Sample A Male 7.4
Sample B Male 6.6
Sample C Female 7.7
Sample D Female 8.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
68546548 Antisense, RP_050120_02_F10, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
68546548 Antisense, RP_050120_02_F10, Mouse strain C57BL/6J (56 days, male) 0.0

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