HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:105.6 nTPM
HPA Brain:159.6 nTPM
GTEx:105.6 nTPM
FANTOM5:446.4 Scaled Tags Per Million
Pig:117.5 nTPM
Mouse:84.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029100Antibody CAB005272
Glial cells MediumHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 159.6
Sample id Sample description nTPM
Hippocampus
nTPM: 120.8
1911 Female, age 85, right hemisphere 143.5
2529 Female, age 94, left hemisphere 131.6
1898 Male, age 80, left hemisphere 126.7
1855 Male, age 76, left hemisphere 114.1
2621 Female, age 67, right hemisphere 109.1
2148 Female, age 91, left hemisphere 99.5
Dentate gyrus
nTPM: 118.6
2530 Female, age 94, left hemisphere 146.0
2528 Male, age 74, both hemispheres 138.0
2010 Male, age 76, both hemispheres 136.0
2246 Female, age 85, both hemispheres 114.3
1927 Female, age 91, both hemispheres 98.2
2531 Female, age 67, both hemispheres 78.9
Entorhinal gyrus
nTPM: 123.0
2117 Female, age 91, right hemisphere 206.2
1938 Female, age 85, left hemisphere 128.2
2764 Male, age 80, right hemisphere 124.6
1787 Male, age 76, left hemisphere 109.1
2613 Female, age 94, left hemisphere 97.6
2686 Male, age 75, right hemisphere 72.2
Hippocampus, CA1
nTPM: 106.3
2527 Male, age 74, both hemispheres 127.5
1873 Female, age 85, both hemispheres 117.2
2082 Female, age 91, right hemisphere 111.6
2749 Male, age 80, left hemisphere 96.1
2045 Male, age 76, both hemispheres 79.2
Hippocampus, CA2
nTPM: 133.0
2249 Male, age 74, both hemispheres 171.3
1963 Male, age 80, left hemisphere 145.6
1940 Female, age 85, left hemisphere 138.4
2113 Female, age 91, right hemisphere 129.2
2437 Female, age 94, left hemisphere 112.8
1892 Male, age 76, both hemispheres 100.5
Hippocampus, CA3
nTPM: 102.5
1891 Female, age 85, both hemispheres 182.4
2436 Male, age 74, both hemispheres 121.2
1867 Male, age 76, both hemispheres 112.3
2137 Male, age 80, left hemisphere 82.3
2620 Female, age 94, left hemisphere 70.0
2861 Female, age 67, both hemispheres 46.7
Parahippocampal cortex
nTPM: 113.3
1990 Female, age 91, right hemisphere 150.3
2692 Male, age 74, both hemispheres 132.0
2532 Female, age 72, left hemisphere 131.9
1850 Male, age 80, both hemispheres 121.6
2018 Male, age 76, both hemispheres 115.9
1933 Female, age 85, both hemispheres 114.2
2245 Female, age 91, both hemispheres 110.6
2250 Female, age 67, right hemisphere 104.5
2693 Female, age 94, both hemispheres 99.5
2622 Female, age 67, right hemisphere 52.4
Perirhinal gyrus
nTPM: 94.5
2521 Female, age 94, right hemisphere 103.0
2848 Male, age 76, right hemisphere 96.6
1794 Male, age 80, right hemisphere 93.6
1847 Female, age 91, left hemisphere 90.2
1841 Female, age 85, right hemisphere 89.1
Subiculum
nTPM: 159.6
2042 Male, age 76, both hemispheres 204.0
1901 Male, age 80, both hemispheres 183.1
1977 Female, age 85, both hemispheres 163.2
2438 Female, age 94, left hemisphere 150.7
2729 Female, age 91, right hemisphere 133.2
2619 Male, age 74, both hemispheres 123.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 105.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.6
Samples: 197

Max nTPM: 364.7
Min nTPM: 18.1
Std nTPM: 60.7
Median nTPM: 89.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 364.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 340.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 294.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 289.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 279.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 271.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 230.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 227.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 225.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 225.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 222.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 446.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 446.4
FF:10153-102I9 76 years, female 578.2
FF:10169-103B7 60 years, female 314.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 117.5
Pig sample Sample description nTPM
Subiculum
nTPM: 95.3
Samples: 4

Max nTPM: 102.3
Min nTPM: 86.5
Sample A Female 102.3
Sample B Female 98.2
Sample C Male 86.5
Sample D Male 94.1
Dorsal hippocampus
nTPM: 117.5
Samples: 4

Max nTPM: 152.9
Min nTPM: 71.2
Sample A Female 147.1
Sample B Female 98.7
Sample C Male 152.9
Sample D Male 71.2
Entorhinal cortex
nTPM: 83.7
Samples: 4

Max nTPM: 98.3
Min nTPM: 72.5
Sample A Female 78.8
Sample B Female 98.3
Sample C Male 85.3
Sample D Male 72.5
Ventral hippocampus
nTPM: 96.4
Samples: 4

Max nTPM: 104.5
Min nTPM: 83.3
Sample A Female 104.5
Sample B Female 83.3
Sample C Male 100.3
Sample D Male 97.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 84.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 75.2
Samples: 4

Max nTPM: 77.6
Min nTPM: 72.8
Sample A Male 76.4
Sample B Male 72.8
Sample C Female 77.6
Sample D Female 73.8
Hippocampal formation
nTPM: 84.2
Samples: 4

Max nTPM: 96.3
Min nTPM: 74.5
Sample A Male 79.0
Sample B Male 74.5
Sample C Female 86.9
Sample D Female 96.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69736028 Antisense, RP_050503_04_A08, Mouse strain C57BL/6J (56 days, male) 0.1

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