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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:15.6 nTPM
HPA Brain:13.8 nTPM
GTEx:15.6 nTPM
FANTOM5:15.0 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:36.1 nTPM
Allen mouse:3.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020959Antibody HPA053471
Glial cells HighLow
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 7.3
1781 Male, age 74, unknown 10.5
1857 Female, age 85, left hemisphere 8.5
2846 Female, age 79, unknown 8.2
2288 Male, age 75, left hemisphere 6.8
2290 Female, age 72, unknown 6.6
2481 Female, age 94, left hemisphere 6.2
1854 Male, age 80, left hemisphere 6.0
2289 Male, age 61, right hemisphere 5.5
Globus pallidus, externus
nTPM: 6.2
2772 Female, age 79, unknown 10.6
2395 Male, age 75, both hemispheres 7.4
1996 Male, age 80, right hemisphere 5.5
2567 Female, age 72, unknown 4.0
2646 Male, age 61, right hemisphere 3.7
Globus pallidus, internus
nTPM: 5.5
2483 Female, age 94, right hemisphere 8.1
2287 Male, age 75, right hemisphere 7.5
2566 Female, age 72, unknown 6.0
1818 Male, age 74, unknown 5.1
2037 Male, age 80, right hemisphere 4.6
2778 Female, age 91, both hemispheres 4.5
2111 Female, age 85, right hemisphere 2.6
Nucleus accumbens
nTPM: 8.5
1856 Female, age 91, right hemisphere 11.7
1783 Male, age 74, unknown 10.6
2391 Female, age 94, left hemisphere 9.2
2698 Female, age 72, unknown 8.3
1806 Female, age 85, left hemisphere 8.2
2824 Male, age 61, right hemisphere 8.0
2286 Male, age 75, left hemisphere 7.4
2732 Male, age 80, right hemisphere 5.1
Nucleus basalis of Meynert
nTPM: 6.5
2484 Female, age 94, left hemisphere 8.0
2821 Male, age 75, both hemispheres 7.3
2393 Male, age 80, right hemisphere 5.6
2569 Male, age 61, both hemispheres 5.1
Nucleus of the diagonal band
nTPM: 13.8
1812 Female, age 91, both hemispheres 20.2
2775 Male, age 80, right hemisphere 18.3
2195 Female, age 85, both hemispheres 12.5
1979 Male, age 74, unknown 9.0
2029 Male, age 61, right hemisphere 9.0
Putamen
nTPM: 6.2
2466 Female, age 79, unknown 7.7
1838 Male, age 80, right hemisphere 7.3
1937 Female, age 91, right hemisphere 6.7
2482 Female, age 94, left hemisphere 6.5
2489 Female, age 72, unknown 5.5
1829 Male, age 74, unknown 4.8
2647 Male, age 75, left hemisphere 4.8
Septal nuclei
nTPM: 10.4
1960 Male, age 74, unknown 15.6
2031 Female, age 72, unknown 14.2
2009 Female, age 91, both hemispheres 13.2
2629 Female, age 94, right hemisphere 10.2
2059 Female, age 85, both hemispheres 8.0
2199 Male, age 80, right hemisphere 5.9
2394 Male, age 61, left hemisphere 5.5
Stria terminalis, bed nucleus
nTPM: 10.8
1974 Female, age 91, both hemispheres 14.3
2201 Male, age 74, unknown 10.0
2486 Female, age 94, both hemispheres 8.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 14.4
Samples: 246

Max nTPM: 27.1
Min nTPM: 6.8
Std nTPM: 3.5
Median nTPM: 14.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 27.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 22.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 21.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 21.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 21.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 20.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 20.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 20.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 20.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 20.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 20.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 20.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 20.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 20.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 19.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 19.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 19.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 19.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 19.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 19.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 19.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 19.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 19.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 19.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 18.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 18.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 18.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 18.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 18.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 18.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 18.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 18.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 18.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 18.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 18.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 18.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 18.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 18.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 18.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 18.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 18.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 18.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 18.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 18.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 18.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 18.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 18.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 17.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 17.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 17.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 17.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 17.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 17.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 17.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 17.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 17.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 17.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 17.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 17.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 17.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 17.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 17.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 17.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 17.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 17.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 17.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 17.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 17.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 16.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 16.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 16.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 16.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 16.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 16.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 16.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 16.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 16.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 16.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 16.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 16.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 16.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 16.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 16.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 15.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 15.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 15.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 15.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 15.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 15.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 15.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 15.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 15.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 15.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 15.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 15.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 15.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 15.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 15.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 15.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 15.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 15.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 15.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 15.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 15.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 15.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 15.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 15.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 15.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 15.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 14.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 14.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 14.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 14.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 14.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 14.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 14.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 14.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 14.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 14.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 14.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 14.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 14.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 14.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 14.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 14.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 14.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 14.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 14.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 14.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 14.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 14.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 14.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 13.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 13.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 13.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 13.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 13.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 13.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 13.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 13.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 13.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 13.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 13.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 13.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 13.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 13.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 13.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 13.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 13.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 13.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 13.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 13.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 13.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 13.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 13.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 13.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 13.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 13.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 12.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 12.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 12.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 12.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 12.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 12.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 12.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 12.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 12.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 12.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 12.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 12.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 12.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 12.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 12.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 12.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 12.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 12.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 12.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 11.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 11.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 11.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 11.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 11.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 11.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 11.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 11.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 11.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 11.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 11.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 11.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 11.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 11.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 11.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 11.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 11.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 10.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 10.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 10.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 10.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 10.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 10.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 10.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 10.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 10.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 10.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 10.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 10.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 10.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 10.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 10.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 10.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 10.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 10.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 9.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 9.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 9.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 9.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 9.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 9.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 9.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 9.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 9.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 9.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 9.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 9.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 9.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 9.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 9.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 9.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 9.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 8.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 8.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 8.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 8.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 8.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 8.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 7.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 7.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 7.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 6.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 15.6
Samples: 246

Max nTPM: 24.3
Min nTPM: 5.9
Std nTPM: 3.9
Median nTPM: 16.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 24.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 23.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 23.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 23.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 23.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 23.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 22.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 22.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 22.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 22.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 22.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 21.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 21.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 21.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 21.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 20.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 20.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 20.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 20.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 20.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 20.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 20.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 20.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 20.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 20.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 20.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 20.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 20.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 20.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 20.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 20.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 19.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 19.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 19.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 19.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 19.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 19.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 19.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 19.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 19.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 19.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 19.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 19.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 19.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 19.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 19.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 19.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 18.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 18.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 18.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 18.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 18.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 18.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 18.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 18.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 18.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 18.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 18.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 18.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 18.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 18.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 18.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 18.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 18.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 18.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 18.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 18.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 18.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 18.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 18.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 18.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 18.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 18.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 18.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 18.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 17.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 17.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 17.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 17.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 17.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 17.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 17.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 17.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 17.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 17.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 17.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 17.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 17.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 17.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 17.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 17.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 17.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 17.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 17.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 17.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 17.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 17.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 17.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 17.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 17.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 17.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 17.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 17.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 16.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 16.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 16.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 16.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 16.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 16.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 16.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 16.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 16.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 16.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 16.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 16.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 16.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 16.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 16.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 16.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 16.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 16.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 16.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 16.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 16.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 16.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 16.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 16.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 16.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 15.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 15.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 15.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 15.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 15.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 15.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 15.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 15.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 15.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 15.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 15.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 15.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 15.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 15.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 15.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 15.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 15.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 15.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 15.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 15.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 15.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 15.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 15.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 14.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 14.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 14.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 14.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 14.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 14.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 14.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 14.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 14.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 14.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 14.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 14.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 14.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 14.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 14.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 14.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 14.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 14.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 13.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 13.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 13.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 13.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 13.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 13.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 13.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 13.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 13.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 13.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 13.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 13.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 13.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 12.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 12.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 12.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 12.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 12.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 12.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 12.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 12.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 12.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 12.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 12.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 12.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 11.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 11.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 11.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 11.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 11.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 11.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 11.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 11.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 11.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 11.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 11.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 10.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 10.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 10.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 10.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 10.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 10.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 10.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 10.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 10.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 9.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 9.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 9.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 9.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 9.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 9.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 9.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 9.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 9.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 9.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 8.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 8.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 8.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 8.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 8.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 8.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 8.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 8.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 8.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 8.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 7.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 7.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 7.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 6.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 6.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 5.9
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Brain - Putamen (basal ganglia)
Average nTPM: 14.2
Samples: 205

Max nTPM: 26.3
Min nTPM: 6.1
Std nTPM: 3.7
Median nTPM: 14.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 26.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 22.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 21.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 21.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 21.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 20.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 20.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 20.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 20.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 20.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 20.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 19.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 19.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 19.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 19.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 19.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 19.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 19.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 19.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 19.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 19.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 19.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 18.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 18.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 18.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 18.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 18.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 18.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 18.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 18.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 18.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 18.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 18.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 18.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 18.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 18.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 18.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 18.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 18.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 18.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 17.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 17.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 17.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 17.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 17.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 17.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 17.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 17.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 17.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 17.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 17.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 17.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 17.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 17.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 17.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 17.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 17.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 17.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 17.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 16.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 16.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 16.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 16.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 16.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 16.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 16.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 16.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 16.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 16.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 16.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 15.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 15.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 15.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 15.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 15.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 15.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 15.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 15.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 15.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 15.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 15.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 15.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 15.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 14.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 14.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 14.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 14.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 14.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 14.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 14.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 14.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 14.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 14.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 14.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 14.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 14.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 14.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 14.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 14.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 14.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 14.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 14.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 14.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 14.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 14.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 14.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 14.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 14.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 14.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 14.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 13.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 13.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 13.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 13.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 13.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 13.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 13.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 13.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 13.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 13.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 13.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 13.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 13.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 13.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 13.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 13.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 12.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 12.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 12.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 12.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 12.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 12.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 12.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 12.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 12.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 12.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 12.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 12.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 12.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 12.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 12.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 12.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 11.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 11.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 11.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 11.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 11.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 11.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 11.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 11.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 11.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 11.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 11.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 11.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 10.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 10.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 10.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 10.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 10.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 10.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 10.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 10.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 10.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 10.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 9.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 9.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 9.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 9.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 9.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 8.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 8.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 8.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 8.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 8.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 8.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 8.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 7.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 7.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 7.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 7.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 7.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 7.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 7.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 7.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 7.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 6.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 6.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

15.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 10.2
FF:10164-103B2 76 years, female 10.2
Nucleus accumbens
Scaled Tags Per Million: 15.0
FF:10037-101F1 23-56 years, mixed 15.0
Putamen
Scaled Tags Per Million: 8.3
FF:10176-103C5 60 years, female 8.3
Globus pallidus
Scaled Tags Per Million: 8.2
FF:10175-103C4 60 years, female 11.7
FF:10161-103A8 76 years, female 4.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.8
Pig sample Sample description nTPM
Caudate
nTPM: 15.7
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.2
Sample A Female 14.7
Sample B Female 17.2
Sample C Male 16.5
Sample D Male 14.2
Putamen
nTPM: 16.1
Samples: 4

Max nTPM: 17.3
Min nTPM: 13.8
Sample A Female 17.3
Sample B Female 13.8
Sample C Male 16.2
Sample D Male 17.0
Septum
nTPM: 20.9
Samples: 4

Max nTPM: 21.9
Min nTPM: 19.7
Sample A Female 21.3
Sample B Female 19.7
Sample C Male 20.5
Sample D Male 21.9
Ventral pallidum
nTPM: 17.2
Samples: 4

Max nTPM: 18.7
Min nTPM: 15.8
Sample A Female 15.8
Sample B Female 18.1
Sample C Male 18.7
Sample D Male 16.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 29.2
Samples: 4

Max nTPM: 30.2
Min nTPM: 28.3
Sample A Male 29.8
Sample B Male 28.3
Sample C Female 30.2
Sample D Female 28.5
Septum
nTPM: 29.5
Samples: 4

Max nTPM: 31.5
Min nTPM: 28.3
Sample A Male 29.3
Sample B Male 28.3
Sample C Female 29.0
Sample D Female 31.5
Ventral forebrain
nTPM: 36.1
Samples: 4

Max nTPM: 38.5
Min nTPM: 35.0
Sample A Male 35.4
Sample B Male 35.0
Sample C Female 35.4
Sample D Female 38.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.3
70430680 Antisense, RP_050614_01_H02, Mouse strain C57BL/6J (56 days, male) 3.3
Pallidum
Expression energy: 3.2
70430680 Antisense, RP_050614_01_H02, Mouse strain C57BL/6J (56 days, male) 3.2

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