HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:166.9 nTPM
HPA Brain:406.4 nTPM
GTEx:166.9 nTPM
FANTOM5:177.8 Scaled Tags Per Million
Pig:346.4 nTPM
Mouse:288.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000397Antibody CAB021929
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 406.4
Sample id Sample description nTPM
Hippocampus
nTPM: 320.1
2621 Female, age 67, right hemisphere 454.3
1855 Male, age 76, left hemisphere 391.9
1898 Male, age 80, left hemisphere 388.2
2148 Female, age 91, left hemisphere 316.1
2529 Female, age 94, left hemisphere 190.2
1911 Female, age 85, right hemisphere 179.9
Dentate gyrus
nTPM: 333.1
2530 Female, age 94, left hemisphere 448.5
1927 Female, age 91, both hemispheres 387.8
2010 Male, age 76, both hemispheres 340.1
2531 Female, age 67, both hemispheres 320.6
2246 Female, age 85, both hemispheres 266.8
2528 Male, age 74, both hemispheres 235.0
Entorhinal gyrus
nTPM: 333.6
2613 Female, age 94, left hemisphere 452.2
2764 Male, age 80, right hemisphere 378.0
1938 Female, age 85, left hemisphere 330.0
2686 Male, age 75, right hemisphere 329.9
1787 Male, age 76, left hemisphere 301.1
2117 Female, age 91, right hemisphere 210.3
Hippocampus, CA1
nTPM: 330.4
2749 Male, age 80, left hemisphere 475.2
2045 Male, age 76, both hemispheres 334.6
1873 Female, age 85, both hemispheres 334.0
2527 Male, age 74, both hemispheres 305.9
2082 Female, age 91, right hemisphere 202.3
Hippocampus, CA2
nTPM: 282.9
1892 Male, age 76, both hemispheres 389.4
1963 Male, age 80, left hemisphere 343.5
2437 Female, age 94, left hemisphere 304.5
1940 Female, age 85, left hemisphere 251.4
2113 Female, age 91, right hemisphere 214.1
2249 Male, age 74, both hemispheres 194.2
Hippocampus, CA3
nTPM: 308.2
2861 Female, age 67, both hemispheres 460.2
2620 Female, age 94, left hemisphere 412.7
2137 Male, age 80, left hemisphere 328.6
1867 Male, age 76, both hemispheres 251.3
2436 Male, age 74, both hemispheres 218.8
1891 Female, age 85, both hemispheres 177.3
Parahippocampal cortex
nTPM: 345.1
2245 Female, age 91, both hemispheres 501.8
2622 Female, age 67, right hemisphere 414.7
2693 Female, age 94, both hemispheres 401.1
1850 Male, age 80, both hemispheres 360.2
2532 Female, age 72, left hemisphere 348.2
1933 Female, age 85, both hemispheres 318.0
2250 Female, age 67, right hemisphere 317.9
1990 Female, age 91, right hemisphere 312.5
2018 Male, age 76, both hemispheres 251.5
2692 Male, age 74, both hemispheres 224.7
Perirhinal gyrus
nTPM: 406.4
1847 Female, age 91, left hemisphere 452.9
1794 Male, age 80, right hemisphere 443.0
2521 Female, age 94, right hemisphere 442.5
2848 Male, age 76, right hemisphere 360.9
1841 Female, age 85, right hemisphere 332.8
Subiculum
nTPM: 223.7
1977 Female, age 85, both hemispheres 265.1
2619 Male, age 74, both hemispheres 242.3
1901 Male, age 80, both hemispheres 241.5
2438 Female, age 94, left hemisphere 231.9
2729 Female, age 91, right hemisphere 187.8
2042 Male, age 76, both hemispheres 173.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 166.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 166.9
Samples: 255

Max nTPM: 678.3
Min nTPM: 3.1
Std nTPM: 119.9
Median nTPM: 153.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 678.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 640.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 602.9
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 599.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 596.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 469.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 462.9
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 446.9
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 442.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 434.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 417.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 177.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 177.8
FF:10169-103B7 60 years, female 226.4
FF:10153-102I9 76 years, female 129.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 346.4
Pig sample Sample description nTPM
Subiculum
nTPM: 292.9
Samples: 4

Max nTPM: 411.8
Min nTPM: 237.6
Sample A Female 411.8
Sample B Female 245.5
Sample C Male 276.8
Sample D Male 237.6
Dorsal hippocampus
nTPM: 255.5
Samples: 4

Max nTPM: 347.8
Min nTPM: 180.6
Sample A Female 347.8
Sample B Female 287.7
Sample C Male 180.6
Sample D Male 206.0
Entorhinal cortex
nTPM: 346.4
Samples: 4

Max nTPM: 381.7
Min nTPM: 292.5
Sample A Female 381.7
Sample B Female 292.5
Sample C Male 371.2
Sample D Male 340.1
Ventral hippocampus
nTPM: 268.8
Samples: 4

Max nTPM: 345.9
Min nTPM: 179.2
Sample A Female 300.5
Sample B Female 179.2
Sample C Male 345.9
Sample D Male 249.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 288.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 288.2
Samples: 4

Max nTPM: 365.1
Min nTPM: 242.2
Sample A Male 274.0
Sample B Male 271.6
Sample C Female 242.2
Sample D Female 365.1
Hippocampal formation
nTPM: 254.8
Samples: 4

Max nTPM: 285.7
Min nTPM: 229.4
Sample A Male 229.4
Sample B Male 271.7
Sample C Female 285.7
Sample D Female 232.2

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