HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:94.0 nTPM
HPA Brain:156.9 nTPM
GTEx:94.0 nTPM
FANTOM5:403.3 Scaled Tags Per Million
Pig:180.0 nTPM
Mouse:104.1 nTPM
Allen mouse:15.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018846Antibody HPA052221
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 156.9
Sample id Sample description nTPM
Hippocampus
nTPM: 150.6
1898 Male, age 80, left hemisphere 190.9
2529 Female, age 94, left hemisphere 159.5
1855 Male, age 76, left hemisphere 144.9
2621 Female, age 67, right hemisphere 144.1
1911 Female, age 85, right hemisphere 140.3
2148 Female, age 91, left hemisphere 123.9
Dentate gyrus
nTPM: 143.9
2530 Female, age 94, left hemisphere 174.3
2010 Male, age 76, both hemispheres 168.0
1927 Female, age 91, both hemispheres 142.1
2246 Female, age 85, both hemispheres 136.3
2528 Male, age 74, both hemispheres 130.5
2531 Female, age 67, both hemispheres 112.4
Entorhinal gyrus
nTPM: 143.6
2686 Male, age 75, right hemisphere 159.6
2117 Female, age 91, right hemisphere 154.3
1938 Female, age 85, left hemisphere 153.0
1787 Male, age 76, left hemisphere 142.0
2764 Male, age 80, right hemisphere 136.0
2613 Female, age 94, left hemisphere 116.9
Hippocampus, CA1
nTPM: 154.4
2749 Male, age 80, left hemisphere 211.0
1873 Female, age 85, both hemispheres 163.0
2527 Male, age 74, both hemispheres 138.0
2045 Male, age 76, both hemispheres 130.7
2082 Female, age 91, right hemisphere 129.4
Hippocampus, CA2
nTPM: 156.9
1963 Male, age 80, left hemisphere 185.4
1892 Male, age 76, both hemispheres 185.2
2249 Male, age 74, both hemispheres 157.8
1940 Female, age 85, left hemisphere 148.2
2437 Female, age 94, left hemisphere 140.2
2113 Female, age 91, right hemisphere 124.7
Hippocampus, CA3
nTPM: 138.7
1867 Male, age 76, both hemispheres 175.4
2137 Male, age 80, left hemisphere 170.9
1891 Female, age 85, both hemispheres 150.9
2436 Male, age 74, both hemispheres 141.8
2861 Female, age 67, both hemispheres 101.0
2620 Female, age 94, left hemisphere 92.5
Parahippocampal cortex
nTPM: 133.3
1850 Male, age 80, both hemispheres 173.0
1933 Female, age 85, both hemispheres 145.0
1990 Female, age 91, right hemisphere 144.9
2018 Male, age 76, both hemispheres 139.0
2245 Female, age 91, both hemispheres 136.6
2692 Male, age 74, both hemispheres 134.5
2250 Female, age 67, right hemisphere 128.5
2532 Female, age 72, left hemisphere 125.5
2693 Female, age 94, both hemispheres 106.6
2622 Female, age 67, right hemisphere 99.5
Perirhinal gyrus
nTPM: 147.9
1847 Female, age 91, left hemisphere 166.6
1794 Male, age 80, right hemisphere 164.4
1841 Female, age 85, right hemisphere 159.3
2848 Male, age 76, right hemisphere 130.3
2521 Female, age 94, right hemisphere 119.1
Subiculum
nTPM: 145.3
1901 Male, age 80, both hemispheres 171.9
2438 Female, age 94, left hemisphere 155.5
2042 Male, age 76, both hemispheres 148.6
1977 Female, age 85, both hemispheres 144.3
2619 Male, age 74, both hemispheres 127.5
2729 Female, age 91, right hemisphere 124.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 94.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.0
Samples: 255

Max nTPM: 195.3
Min nTPM: 35.0
Std nTPM: 27.8
Median nTPM: 91.9
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 195.3
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 190.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 181.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 174.0
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 172.8
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 165.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 165.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 160.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 155.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 148.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 148.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 403.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 403.3
FF:10169-103B7 60 years, female 431.0
FF:10153-102I9 76 years, female 375.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 180.0
Pig sample Sample description nTPM
Subiculum
nTPM: 156.3
Samples: 4

Max nTPM: 196.6
Min nTPM: 137.9
Sample A Female 196.6
Sample B Female 144.6
Sample C Male 137.9
Sample D Male 145.9
Dorsal hippocampus
nTPM: 180.0
Samples: 4

Max nTPM: 215.0
Min nTPM: 139.5
Sample A Female 215.0
Sample B Female 177.1
Sample C Male 188.3
Sample D Male 139.5
Entorhinal cortex
nTPM: 157.8
Samples: 4

Max nTPM: 198.9
Min nTPM: 126.8
Sample A Female 149.1
Sample B Female 198.9
Sample C Male 156.4
Sample D Male 126.8
Ventral hippocampus
nTPM: 151.6
Samples: 4

Max nTPM: 174.1
Min nTPM: 135.4
Sample A Female 174.1
Sample B Female 139.2
Sample C Male 135.4
Sample D Male 157.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 104.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.2
Samples: 4

Max nTPM: 101.4
Min nTPM: 97.4
Sample A Male 101.4
Sample B Male 97.4
Sample C Female 98.7
Sample D Female 99.2
Hippocampal formation
nTPM: 104.1
Samples: 4

Max nTPM: 110.3
Min nTPM: 96.1
Sample A Male 104.5
Sample B Male 105.3
Sample C Female 110.3
Sample D Female 96.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
72182999 Antisense, RP_050927_03_B03, Mouse strain C57BL/6J (56 days, male) 15.8

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