A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
93.0
nTPM
Monaco:
386.4
nTPM
Schmiedel:
71.8
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
93.0
HPA sample
nTPM
Classical monocyte nTPM: 75.8
Samples: 6
Max nTPM: 94.7
Min nTPM: 64.3
P10809_1003
94.7
P10809_1020
86.8
P10809_1039
73.3
P10809_1058
69.2
P10809_1080
66.3
P10809_1107
64.3
Intermediate monocyte nTPM: 84.9
Samples: 6
Max nTPM: 101.6
Min nTPM: 61.5
P10809_1004
86.0
P10809_1023
101.6
P10809_1042
93.5
P10809_1061
96.2
P10809_1081
70.5
P10809_1108
61.5
Non-classical monocyte nTPM: 93.0
Samples: 5
Max nTPM: 149.4
Min nTPM: 63.4
P10809_1005
85.4
P10809_1053
99.5
P10809_1072
149.4
P10809_1082
67.1
P10809_1109
63.4
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
386.4
Monaco sample
nTPM
Classical monocyte nTPM: 374.2
Samples: 4
Max nTPM: 400.8
Min nTPM: 333.9
RHH5313_R3680
333.9
RHH5221_R3593
400.8
RHH5250_R3622
385.1
RHH5279_R3651
377.1
Intermediate monocyte nTPM: 349.3
Samples: 4
Max nTPM: 392.2
Min nTPM: 271.0
RHH5314_R3681
346.4
RHH5222_R3594
392.2
RHH5251_R3623
271.0
RHH5280_R3652
387.6
Non-classical monocyte nTPM: 386.4
Samples: 4
Max nTPM: 406.2
Min nTPM: 373.6
RHH5315_R3682
389.1
RHH5223_R3595
406.2
RHH5252_R3624
376.7
RHH5281_R3653
373.6
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
71.8
Schmiedel sample id
TPM
Classical monocyte TPM: 58.2
Samples: 91
Max TPM: 73.8
Min TPM: 45.5
MONOCYTES_1
73.8
MONOCYTES_2
72.6
MONOCYTES_3
72.2
MONOCYTES_4
71.4
MONOCYTES_5
70.2
MONOCYTES_6
68.6
MONOCYTES_7
67.8
MONOCYTES_8
66.4
MONOCYTES_9
66.3
MONOCYTES_10
66.2
MONOCYTES_11
65.3
MONOCYTES_12
64.8
MONOCYTES_13
64.4
MONOCYTES_14
63.6
MONOCYTES_15
63.3
MONOCYTES_16
63.0
MONOCYTES_17
63.0
MONOCYTES_18
62.7
MONOCYTES_19
62.7
MONOCYTES_20
62.6
MONOCYTES_21
62.4
MONOCYTES_22
61.9
MONOCYTES_23
61.7
MONOCYTES_24
61.6
MONOCYTES_25
61.4
MONOCYTES_26
61.3
MONOCYTES_27
61.0
MONOCYTES_28
60.7
MONOCYTES_29
60.6
MONOCYTES_30
60.0
MONOCYTES_31
60.0
MONOCYTES_32
59.7
MONOCYTES_33
59.4
MONOCYTES_34
59.3
MONOCYTES_35
59.0
MONOCYTES_36
59.0
MONOCYTES_37
58.8
MONOCYTES_38
58.8
MONOCYTES_39
58.7
MONOCYTES_40
58.6
MONOCYTES_41
58.6
MONOCYTES_42
58.6
MONOCYTES_43
58.5
MONOCYTES_44
58.4
MONOCYTES_45
58.3
MONOCYTES_46
58.1
MONOCYTES_47
58.0
MONOCYTES_48
57.8
MONOCYTES_49
57.6
MONOCYTES_50
57.6
MONOCYTES_51
57.4
MONOCYTES_52
57.3
MONOCYTES_53
56.9
MONOCYTES_54
56.7
MONOCYTES_55
56.5
MONOCYTES_56
56.3
MONOCYTES_57
56.3
MONOCYTES_58
56.3
MONOCYTES_59
56.2
MONOCYTES_60
56.0
MONOCYTES_61
55.8
MONOCYTES_62
55.8
MONOCYTES_63
55.4
MONOCYTES_64
55.3
MONOCYTES_65
55.3
MONOCYTES_66
55.3
MONOCYTES_67
55.2
MONOCYTES_68
55.1
MONOCYTES_69
55.0
MONOCYTES_70
55.0
MONOCYTES_71
54.0
MONOCYTES_72
53.8
MONOCYTES_73
53.3
MONOCYTES_74
53.1
MONOCYTES_75
52.9
MONOCYTES_76
52.7
MONOCYTES_77
52.7
MONOCYTES_78
51.6
MONOCYTES_79
51.5
MONOCYTES_80
51.1
MONOCYTES_81
51.1
MONOCYTES_82
50.2
MONOCYTES_83
50.1
MONOCYTES_84
49.0
MONOCYTES_85
48.8
MONOCYTES_86
48.7
MONOCYTES_87
48.0
MONOCYTES_88
47.5
MONOCYTES_89
47.4
MONOCYTES_90
46.6
MONOCYTES_91
45.5
Show allShow less
Non-classical monocyte TPM: 71.8
Samples: 90
Max TPM: 91.3
Min TPM: 46.2
M2_1
91.3
M2_2
89.2
M2_3
89.1
M2_4
89.0
M2_5
84.3
M2_6
83.1
M2_7
82.5
M2_8
82.4
M2_9
81.9
M2_10
81.0
M2_11
80.3
M2_12
80.3
M2_13
79.5
M2_14
79.5
M2_15
79.0
M2_16
79.0
M2_17
78.8
M2_18
78.8
M2_19
78.4
M2_20
77.9
M2_21
77.8
M2_22
77.7
M2_23
77.5
M2_24
77.2
M2_25
77.1
M2_26
77.0
M2_27
76.8
M2_28
76.6
M2_29
76.6
M2_30
76.5
M2_31
76.1
M2_32
75.9
M2_33
75.4
M2_34
75.3
M2_35
74.9
M2_36
74.0
M2_37
73.6
M2_38
73.6
M2_39
73.6
M2_40
73.5
M2_41
72.8
M2_42
72.1
M2_43
72.1
M2_44
71.6
M2_45
71.4
M2_46
71.2
M2_47
71.1
M2_48
70.9
M2_49
70.6
M2_50
70.5
M2_51
70.4
M2_52
70.2
M2_53
69.9
M2_54
69.9
M2_55
69.3
M2_56
69.2
M2_57
68.5
M2_58
68.4
M2_59
67.7
M2_60
67.7
M2_61
67.6
M2_62
67.5
M2_63
67.4
M2_64
66.9
M2_65
66.9
M2_66
66.8
M2_67
66.6
M2_68
66.3
M2_69
66.2
M2_70
65.8
M2_71
65.5
M2_72
64.6
M2_73
64.4
M2_74
64.1
M2_75
63.9
M2_76
63.8
M2_77
63.3
M2_78
63.3
M2_79
63.2
M2_80
62.8
M2_81
62.3
M2_82
61.3
M2_83
60.3
M2_84
60.3
M2_85
59.9
M2_86
59.2
M2_87
59.0
M2_88
58.6
M2_89
57.7
M2_90
46.2
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
