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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
110.3
nTPM
Monaco:
257.5
nTPM
Schmiedel:
363.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
110.3
HPA sample
nTPM
gdT-cell nTPM: 34.9
Samples: 6
Max nTPM: 43.7
Min nTPM: 30.4
P10809_1007
33.0
P10809_1022
38.3
P10809_1041
32.4
P10809_1060
30.4
P10809_1077
43.7
P10809_1098
31.7
MAIT T-cell nTPM: 56.6
Samples: 6
Max nTPM: 69.3
Min nTPM: 45.8
P10809_1006
69.3
P10809_1024
54.6
P10809_1043
45.8
P10809_1062
47.9
P10809_1083
58.2
P10809_1097
63.7
Memory CD4 T-cell nTPM: 58.3
Samples: 6
Max nTPM: 75.2
Min nTPM: 46.6
P10809_1014
75.2
P10809_1026
46.6
P10809_1045
55.1
P10809_1064
54.3
P10809_1086
55.1
P10809_1113
63.3
Memory CD8 T-cell nTPM: 42.7
Samples: 5
Max nTPM: 55.8
Min nTPM: 32.8
P10809_1012
55.8
P10809_1027
38.5
P10809_1046
32.8
P10809_1065
36.6
P10809_1111
49.8
Naive CD4 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 44.4
Min nTPM: 19.3
P10809_1015
44.4
P10809_1030
23.7
P10809_1049
19.3
P10809_1068
26.0
P10809_1085
29.5
P10809_1112
24.5
Naive CD8 T-cell nTPM: 26.4
Samples: 6
Max nTPM: 35.3
Min nTPM: 19.4
P10809_1016
26.7
P10809_1031
24.9
P10809_1050
24.6
P10809_1069
27.2
P10809_1087
35.3
P10809_1110
19.4
T-reg nTPM: 110.3
Samples: 6
Max nTPM: 140.4
Min nTPM: 67.0
P10809_1018
140.4
P10809_1037
96.9
P10809_1056
67.0
P10809_1075
111.4
P10809_1094
118.4
P10809_1106
127.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
257.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 235.0
Samples: 4
Max nTPM: 246.9
Min nTPM: 211.6
RHH5202_R3573
241.3
RHH5230_R3602
246.9
RHH5259_R3631
240.3
RHH5288_R3660
211.6
Effector memory CD8 T-cell nTPM: 212.1
Samples: 4
Max nTPM: 275.7
Min nTPM: 157.1
RHH5203_R3574
275.7
RHH5231_R3603
157.1
RHH5260_R3632
214.5
RHH5289_R3661
201.2
MAIT T-cell nTPM: 239.1
Samples: 4
Max nTPM: 291.5
Min nTPM: 158.8
RHH5233_R3605
276.2
RHH5205_R3576
291.5
RHH5262_R3634
229.7
RHH5297_R3663
158.8
Memory CD4 T-cell TFH nTPM: 250.7
Samples: 4
Max nTPM: 322.2
Min nTPM: 208.5
RHH5300_R3666
208.5
RHH5236_R3608
217.5
RHH5265_R3637
254.5
RHH5208_R3579
322.2
Memory CD4 T-cell Th1 nTPM: 206.8
Samples: 4
Max nTPM: 275.6
Min nTPM: 158.1
RHH5210_R3581
158.1
RHH5302_R3668
205.6
RHH5238_R3610
187.9
RHH5267_R3639
275.6
Memory CD4 T-cell Th1/Th17 nTPM: 252.1
Samples: 4
Max nTPM: 310.9
Min nTPM: 220.3
RHH5303_R3669
228.6
RHH5211_R3582
220.3
RHH5239_R3611
310.9
RHH5268_R3640
248.4
Memory CD4 T-cell Th17 nTPM: 257.6
Samples: 4
Max nTPM: 285.7
Min nTPM: 226.8
RHH5304_R3670
244.4
RHH5212_R3583
226.8
RHH5240_R3612
285.7
RHH5269_R3641
273.3
Memory CD4 T-cell Th2 nTPM: 240.5
Samples: 4
Max nTPM: 260.0
Min nTPM: 206.9
RHH5305_R3671
237.8
RHH5213_R3584
260.0
RHH5241_R3613
206.9
RHH5270_R3642
257.2
Naive CD4 T-cell nTPM: 99.1
Samples: 4
Max nTPM: 114.0
Min nTPM: 69.4
RHH5306_R3672
106.0
RHH5214_R3585
106.8
RHH5242_R3614
69.4
RHH5271_R3643
114.0
Naive CD8 T-cell nTPM: 79.8
Samples: 4
Max nTPM: 90.5
Min nTPM: 58.5
RHH5201_R3572
86.5
RHH5229_R3601
58.5
RHH5258_R3630
83.6
RHH5287_R3659
90.5
Non-Vd2 gdTCR nTPM: 138.1
Samples: 4
Max nTPM: 185.8
Min nTPM: 111.6
RHH5235_R3607
135.4
RHH5264_R3636
119.6
RHH5207_R3578
185.8
RHH5299_R3665
111.6
T-reg nTPM: 234.5
Samples: 4
Max nTPM: 276.9
Min nTPM: 190.4
RHH5301_R3667
239.4
RHH5237_R3609
190.4
RHH5266_R3638
276.9
RHH5209_R3580
231.4
Terminal effector memory CD4 T-cell nTPM: 162.1
Samples: 2
Max nTPM: 165.9
Min nTPM: 158.3
RHH5243_R3615
165.9
RHH5272_R3644
158.3
Terminal effector memory CD8 T-cell nTPM: 153.7
Samples: 4
Max nTPM: 175.4
Min nTPM: 106.0
RHH5232_R3604
158.7
RHH5204_R3575
106.0
RHH5261_R3633
175.4
RHH5296_R3662
174.7
Vd2 gdTCR nTPM: 171.4
Samples: 4
Max nTPM: 207.9
Min nTPM: 136.6
RHH5234_R3606
207.9
RHH5206_R3577
136.6
RHH5263_R3635
203.8
RHH5298_R3664
137.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.