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  • TISSUE

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  • ATP1A2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:193.2 nTPM
HPA Brain:569.3 nTPM
GTEx:193.2 nTPM
Pig:366.5 nTPM
Mouse:587.3 nTPM
Allen mouse:11.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

569.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 340.6
1961 Female, age 42, unknown 407.9
2226 Male, age 75, left hemisphere 273.4
Dorsomedial nucleus
nTPM: 486.7
1989 Male, age 62, unknown 686.2
2017 Female, age 42, unknown 389.9
2041 Female, age 72, unknown 384.0
Lateral hypothalamic area
nTPM: 291.1
1791 Male, age 80, right hemisphere 496.7
2412 Male, age 62, unknown 283.8
2271 Male, age 75, both hemispheres 209.5
2228 Male, age 66, unknown 174.5
Mammillary body
nTPM: 569.3
1945 Male, age 80, right hemisphere 664.7
2413 Male, age 66, unknown 645.4
1923 Female, age 72, unknown 576.6
1834 Female, age 42, unknown 537.6
1948 Female, age 72, unknown 422.5
Paraventricular nucleus
nTPM: 270.9
2700 Male, age 62, unknown 270.9
Preoptic area
nTPM: 439.3
1861 Female, age 42, unknown 584.0
2414 Female, age 72, unknown 371.1
1907 Male, age 80, right hemisphere 363.0
Supraoptic nucleus
nTPM: 414.8
1894 Female, age 72, unknown 435.9
2835 Female, age 72, unknown 419.9
2043 Male, age 62, unknown 388.6
Ventromedial nucleus
nTPM: 453.0
1822 Female, age 42, unknown 468.2
1982 Female, age 72, unknown 437.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 193.2
Samples: 257

Max nTPM: 786.1
Min nTPM: 23.2
Std nTPM: 98.8
Median nTPM: 172.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 786.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 606.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 549.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 459.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 451.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 429.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 429.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 427.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 406.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 403.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 400.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 395.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 388.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 380.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 378.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 370.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 365.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 357.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 339.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 331.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 330.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 329.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 318.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 318.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 317.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 313.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 313.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 312.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 312.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 309.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 302.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 302.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 299.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 298.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 297.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 294.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 286.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 283.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 280.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 275.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 272.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 272.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 270.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 267.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 266.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 264.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 263.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 262.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 262.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 261.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 261.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 259.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 258.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 253.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 252.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 250.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 249.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 248.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 245.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 244.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 244.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 243.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 242.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 238.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 237.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 237.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 235.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 234.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 231.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 229.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 229.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 229.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 229.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 229.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 225.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 223.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 215.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 214.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 213.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 212.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 211.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 209.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 208.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 208.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 207.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 206.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 205.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 205.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 204.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 203.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 203.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 203.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 203.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 202.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 201.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 201.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 200.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 200.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 198.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 198.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 197.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 197.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 197.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 194.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 193.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 193.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 192.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 192.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 190.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 189.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 188.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 186.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 186.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 185.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 183.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 183.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 181.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 180.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 180.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 179.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 177.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 176.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 176.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 175.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 174.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 173.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 173.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 173.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 172.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 172.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 171.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 171.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 169.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 169.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 169.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 168.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 166.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 165.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 165.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 163.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 163.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 161.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 161.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 161.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 160.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 158.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 158.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 158.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 157.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 156.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 156.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 153.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 153.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 152.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 152.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 152.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 150.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 150.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 149.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 148.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 148.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 148.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 145.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 145.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 144.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 144.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 143.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 143.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 142.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 142.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 142.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 141.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 140.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 140.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 140.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 139.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 138.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 137.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 136.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 136.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 134.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 134.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 134.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 133.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 133.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 132.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 131.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 130.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 128.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 127.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 127.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 126.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 126.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 125.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 125.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 123.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 122.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 121.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 121.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 121.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 121.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 120.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 118.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 118.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 117.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 116.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 113.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 113.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 112.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 112.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 112.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 112.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 112.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 111.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 108.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 106.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 106.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 106.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 106.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 105.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 104.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 104.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 103.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 103.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 102.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 100.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 100.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 100.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 97.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 95.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 94.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 94.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 93.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 91.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 90.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 90.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 88.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 87.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 84.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 84.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 84.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 83.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 80.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 79.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 79.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 76.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 75.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 72.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 72.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 66.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 65.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 64.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 63.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 61.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 53.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 40.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 23.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

366.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 366.5
Samples: 4

Max nTPM: 417.8
Min nTPM: 282.0
Sample A Female 395.6
Sample B Female 417.8
Sample C Male 370.7
Sample D Male 282.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

587.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 587.3
Samples: 4

Max nTPM: 678.3
Min nTPM: 546.6
Sample A Male 563.9
Sample B Male 560.2
Sample C Female 546.6
Sample D Female 678.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.1
69173256 Antisense, RP_050329_01_C04, Mouse strain C57BL/6J (56 days, male) 11.1

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