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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • CELL LINE

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  • EVOLUTION

  • ATP1A2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:499.3 nTPM
GTEx:555.2 nTPM
FANTOM5:703.7 Scaled Tags Per Million
Pig:400.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

499.3
Sample id Sample description nTPM
Putamen
nTPM: 499.3
2647 Male, age 75, left hemisphere 600.1
2482 Female, age 94, left hemisphere 595.6
1838 Male, age 80, right hemisphere 561.2
2489 Female, age 72, unknown 533.7
1829 Male, age 74, unknown 423.1
1937 Female, age 91, right hemisphere 397.8
2466 Female, age 79, unknown 383.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

555.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 555.2
Samples: 254

Max nTPM: 1374.4
Min nTPM: 84.4
Std nTPM: 236.3
Median nTPM: 521.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1374.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1202.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1174.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1132.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1125.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1065.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 996.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 994.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 994.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 984.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 980.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 978.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 973.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 947.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 939.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 923.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 922.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 921.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 919.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 911.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 908.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 908.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 900.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 892.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 892.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 890.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 888.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 885.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 885.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 880.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 876.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 876.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 876.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 870.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 834.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 832.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 831.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 829.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 821.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 813.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 810.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 804.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 800.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 797.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 794.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 793.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 791.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 789.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 780.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 779.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 771.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 771.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 764.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 763.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 754.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 744.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 742.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 736.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 734.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 732.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 732.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 728.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 728.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 719.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 716.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 711.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 710.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 708.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 695.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 695.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 693.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 688.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 670.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 668.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 663.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 658.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 658.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 657.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 656.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 652.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 649.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 638.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 633.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 631.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 631.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 630.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 629.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 629.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 620.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 618.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 618.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 617.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 613.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 611.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 609.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 605.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 604.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 603.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 600.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 596.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 594.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 590.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 586.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 583.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 581.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 581.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 580.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 578.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 576.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 573.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 561.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 558.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 558.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 556.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 552.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 551.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 549.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 545.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 542.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 541.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 541.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 531.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 530.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 529.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 529.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 528.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 523.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 519.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 517.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 517.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 515.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 512.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 512.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 508.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 506.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 504.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 496.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 495.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 491.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 490.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 490.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 486.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 483.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 481.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 477.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 475.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 470.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 468.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 468.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 467.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 466.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 461.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 461.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 459.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 458.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 457.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 455.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 454.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 451.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 448.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 446.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 442.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 441.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 438.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 435.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 434.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 434.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 433.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 432.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 432.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 430.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 428.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 427.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 427.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 417.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 416.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 416.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 415.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 415.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 412.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 412.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 411.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 410.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 407.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 402.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 394.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 393.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 393.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 393.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 391.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 387.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 386.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 386.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 382.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 382.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 382.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 376.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 376.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 372.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 371.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 367.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 365.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 365.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 360.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 358.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 357.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 354.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 354.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 353.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 342.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 340.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 339.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 335.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 335.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 334.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 332.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 327.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 320.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 319.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 315.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 313.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 309.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 296.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 294.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 284.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 283.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 280.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 274.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 273.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 271.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 259.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 254.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 246.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 245.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 241.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 241.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 236.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 210.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 210.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 208.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 192.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 185.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 184.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 175.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 162.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 151.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 146.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 141.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 124.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 123.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 114.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 107.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 96.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 84.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

703.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 703.7
FF:10176-103C5 60 years, female 703.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

400.1
Pig sample Sample description nTPM
Putamen
nTPM: 400.1
Samples: 3

Max nTPM: 513.7
Min nTPM: 301.2
Sample B Female 301.2
Sample C Male 513.7
Sample D Male 385.4

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