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BETA
  • SUMMARY

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  • ATP1A2
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:87.6 nTPM
HPA Brain:508.2 nTPM
GTEx:87.6 nTPM
FANTOM5:1214.0 Scaled Tags Per Million
Mouse:570.3 nTPM
Rat:883.1 nTPM
Pig:759.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 184510
Sample Intensity
Spinal cord_01
155203
Spinal cord_02
201771
Spinal cord_03
182526
Spinal cord_04
313462
Spinal cord_05
181739
Spinal cord_06
159248
Spinal cord_07
186494
Spinal cord_08
265378

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

508.2
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 375.1
2819 Male, age 47, both hemispheres 468.0
2818 Female, age 79, both hemispheres 458.9
2193 Male, age 75, both hemispheres 300.1
2734 Male, age 80, both hemispheres 273.5
Cervical spinal cord, central gray
nTPM: 483.6
2048 Male, age 55, midline 589.0
1981 Female, age 72, midline 529.3
2565 Male, age 75, midline 502.9
2194 Female, age 79, both hemispheres 419.7
2816 Male, age 47, midline 377.3
Cervical spinal cord, dorsal horn
nTPM: 448.9
2721 Male, age 90, both hemispheres 650.0
2297 Male, age 75, both hemispheres 466.4
2173 Female, age 72, unknown 463.0
1877 Male, age 55, unknown 417.1
2069 Male, age 47, both hemispheres 397.1
2296 Male, age 66, both hemispheres 300.1
Cervical spinal cord, ventral horn
nTPM: 508.2
2295 Male, age 66, both hemispheres 641.5
2809 Male, age 90, both hemispheres 615.1
2098 Female, age 72, unknown 575.2
2820 Female, age 79, both hemispheres 433.0
2068 Male, age 55, unknown 394.4
2480 Male, age 75, both hemispheres 390.2
Dorsal funiculus (white matter)
nTPM: 412.3
2812 Male, age 66, both hemispheres 577.8
2064 Female, age 79, both hemispheres 490.9
2817 Male, age 47, both hemispheres 428.8
2128 Male, age 75, both hemispheres 297.3
2810 Male, age 90, both hemispheres 266.7
Lateral funiculus (white matter)
nTPM: 229.6
2094 Female, age 79, both hemispheres 408.8
2192 Male, age 75, both hemispheres 176.1
2099 Male, age 90, both hemispheres 170.3
2294 Male, age 66, both hemispheres 163.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 87.6
Samples: 204

Max nTPM: 251.0
Min nTPM: 13.5
Std nTPM: 45.7
Median nTPM: 79.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 251.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 236.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 226.5
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 222.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 219.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 202.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 192.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 184.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 181.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 180.8
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 179.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 172.0
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 168.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 160.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 156.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 155.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 153.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 152.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 151.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 148.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 148.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 147.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 147.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 146.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 145.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 144.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 143.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 140.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 137.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 136.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 136.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 133.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 132.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 131.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 127.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 127.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 127.3
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 127.0
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 126.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 124.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 122.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 120.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 120.5
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 120.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 119.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 119.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 118.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 117.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 114.5
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 114.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 113.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 113.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 113.1
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 110.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 109.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 109.5
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 108.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 108.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 107.0
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 105.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 103.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 102.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 101.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 101.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 101.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 99.2
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 99.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 97.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 96.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 96.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 95.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 93.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 92.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 92.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 90.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 90.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 90.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 89.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 89.2
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 89.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 88.8
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 88.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 87.9
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 87.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 87.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 87.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 86.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 85.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 84.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 83.9
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 83.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 83.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 83.3
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 83.3
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 82.9
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 82.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 81.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 81.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 79.9
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 79.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 79.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 79.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 79.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 79.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 79.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 77.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 76.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 76.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 76.0
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 75.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 75.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 74.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 73.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 72.8
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 72.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 72.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 72.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 72.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 71.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 70.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 70.3
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 70.3
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 69.7
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 69.1
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 68.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 68.2
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 68.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 67.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 67.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 67.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 65.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 65.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 64.8
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 64.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 63.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 63.6
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 63.5
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 63.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 63.0
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 61.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 60.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 60.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 60.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 59.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 59.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 59.2
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 58.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 58.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 57.2
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 56.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 55.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 55.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 53.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 53.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 52.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 51.9
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 51.6
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 51.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 50.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 50.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 50.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 49.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 48.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 48.0
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 47.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 47.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 47.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 47.4
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 47.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 46.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 45.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 44.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 44.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 44.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 44.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 43.8
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 42.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 41.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 40.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 40.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 40.0
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 39.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 38.8
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 37.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 36.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 36.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 33.8
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 33.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 33.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 32.3
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 32.1
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 30.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 30.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 28.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 27.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 27.4
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 26.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 23.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 21.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 21.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 20.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 19.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 13.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 13.5
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1214.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1214.0
FF:10181-103D1 60 years, female 1532.5
FF:10159-103A6 76 years, female 895.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

759.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 457.2
Samples: 4

Max nTPM: 536.3
Min nTPM: 338.1
Sample A Female 463.9
Sample B Female 338.1
Sample C Male 490.4
Sample D Male 536.3
Ventral spinal cord
nTPM: 759.1
Samples: 4

Max nTPM: 938.9
Min nTPM: 487.9
Sample A Female 758.1
Sample B Female 851.3
Sample C Male 938.9
Sample D Male 487.9

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

570.3
Mouse sample Sample description nTPM
Spinal cord
nTPM: 570.3
Samples: 4

Max nTPM: 638.2
Min nTPM: 534.8
Sample A 556.8
Sample B 534.8
Sample C 551.3
Sample D 638.2

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

883.1
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 883.1
Samples: 4

Max nTPM: 918.7
Min nTPM: 848.3
Sample A 907.4
Sample A 848.3
Sample A 857.8
Sample A 918.7

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