HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:86.7 nTPM
HPA Brain:84.1 nTPM
GTEx:86.7 nTPM
FANTOM5:219.6 Scaled Tags Per Million
Pig:128.6 nTPM
Mouse:129.6 nTPM
Allen mouse:11.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052643
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 84.1
Sample id Sample description nTPM
Hippocampus
nTPM: 78.7
1898 Male, age 80, left hemisphere 86.5
2621 Female, age 67, right hemisphere 86.4
1911 Female, age 85, right hemisphere 76.7
2529 Female, age 94, left hemisphere 75.9
2148 Female, age 91, left hemisphere 73.6
1855 Male, age 76, left hemisphere 73.1
Dentate gyrus
nTPM: 76.8
2530 Female, age 94, left hemisphere 91.5
2010 Male, age 76, both hemispheres 80.7
1927 Female, age 91, both hemispheres 79.7
2531 Female, age 67, both hemispheres 74.8
2246 Female, age 85, both hemispheres 69.4
2528 Male, age 74, both hemispheres 64.8
Entorhinal gyrus
nTPM: 76.7
1938 Female, age 85, left hemisphere 83.5
2613 Female, age 94, left hemisphere 83.4
2764 Male, age 80, right hemisphere 78.4
2686 Male, age 75, right hemisphere 72.9
1787 Male, age 76, left hemisphere 72.0
2117 Female, age 91, right hemisphere 70.1
Hippocampus, CA1
nTPM: 83.3
2749 Male, age 80, left hemisphere 123.2
1873 Female, age 85, both hemispheres 82.9
2045 Male, age 76, both hemispheres 76.3
2527 Male, age 74, both hemispheres 74.0
2082 Female, age 91, right hemisphere 60.1
Hippocampus, CA2
nTPM: 78.7
1963 Male, age 80, left hemisphere 109.5
1892 Male, age 76, both hemispheres 89.3
1940 Female, age 85, left hemisphere 71.9
2437 Female, age 94, left hemisphere 70.1
2113 Female, age 91, right hemisphere 66.0
2249 Male, age 74, both hemispheres 65.4
Hippocampus, CA3
nTPM: 84.1
2137 Male, age 80, left hemisphere 105.2
1867 Male, age 76, both hemispheres 88.2
2861 Female, age 67, both hemispheres 84.4
2620 Female, age 94, left hemisphere 78.5
1891 Female, age 85, both hemispheres 77.9
2436 Male, age 74, both hemispheres 70.5
Parahippocampal cortex
nTPM: 71.4
2245 Female, age 91, both hemispheres 79.9
1850 Male, age 80, both hemispheres 78.1
2532 Female, age 72, left hemisphere 73.4
1933 Female, age 85, both hemispheres 72.8
2018 Male, age 76, both hemispheres 71.9
1990 Female, age 91, right hemisphere 69.7
2692 Male, age 74, both hemispheres 69.1
2250 Female, age 67, right hemisphere 68.3
2622 Female, age 67, right hemisphere 67.4
2693 Female, age 94, both hemispheres 63.8
Perirhinal gyrus
nTPM: 74.6
1794 Male, age 80, right hemisphere 84.9
1847 Female, age 91, left hemisphere 80.1
1841 Female, age 85, right hemisphere 76.3
2521 Female, age 94, right hemisphere 67.7
2848 Male, age 76, right hemisphere 63.9
Subiculum
nTPM: 72.5
1901 Male, age 80, both hemispheres 80.2
1977 Female, age 85, both hemispheres 77.2
2042 Male, age 76, both hemispheres 77.1
2619 Male, age 74, both hemispheres 69.9
2438 Female, age 94, left hemisphere 69.2
2729 Female, age 91, right hemisphere 61.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 86.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.7
Samples: 255

Max nTPM: 146.9
Min nTPM: 42.3
Std nTPM: 22.0
Median nTPM: 82.7
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 146.9
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 145.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 145.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 144.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 142.4
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 141.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 140.3
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 138.7
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 138.1
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 131.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 130.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 219.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 219.6
FF:10169-103B7 60 years, female 252.3
FF:10153-102I9 76 years, female 186.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 128.6
Pig sample Sample description nTPM
Subiculum
nTPM: 124.0
Samples: 4

Max nTPM: 155.3
Min nTPM: 105.7
Sample A Female 155.3
Sample B Female 118.1
Sample C Male 116.7
Sample D Male 105.7
Dorsal hippocampus
nTPM: 128.6
Samples: 4

Max nTPM: 153.4
Min nTPM: 106.6
Sample A Female 153.4
Sample B Female 127.4
Sample C Male 127.1
Sample D Male 106.6
Entorhinal cortex
nTPM: 121.8
Samples: 4

Max nTPM: 138.7
Min nTPM: 101.7
Sample A Female 126.6
Sample B Female 120.2
Sample C Male 138.7
Sample D Male 101.7
Ventral hippocampus
nTPM: 126.2
Samples: 4

Max nTPM: 161.0
Min nTPM: 99.5
Sample A Female 122.5
Sample B Female 99.5
Sample C Male 161.0
Sample D Male 121.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 129.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 129.6
Samples: 4

Max nTPM: 136.4
Min nTPM: 114.6
Sample A Male 133.0
Sample B Male 114.6
Sample C Female 134.3
Sample D Female 136.4
Hippocampal formation
nTPM: 128.8
Samples: 4

Max nTPM: 137.0
Min nTPM: 125.7
Sample A Male 125.7
Sample B Male 125.7
Sample C Female 137.0
Sample D Female 126.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
294052 Antisense, RP_040617_02_F11, Mouse strain C57BL/6J (56 days, male) 16.0
67936005 Antisense, RP_041018_01_F01, Mouse strain C57BL/6J (56 days, male) 7.9

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