A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
9.8
nTPM
Monaco:
57.0
nTPM
Schmiedel:
84.0
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
9.8
HPA sample
nTPM
Classical monocyte nTPM: 6.9
Samples: 6
Max nTPM: 8.5
Min nTPM: 5.1
P10809_1003
7.4
P10809_1020
7.2
P10809_1039
5.8
P10809_1058
7.4
P10809_1080
8.5
P10809_1107
5.1
Intermediate monocyte nTPM: 7.3
Samples: 6
Max nTPM: 13.0
Min nTPM: 3.3
P10809_1004
9.4
P10809_1023
6.0
P10809_1042
5.1
P10809_1061
13.0
P10809_1081
7.0
P10809_1108
3.3
Non-classical monocyte nTPM: 9.8
Samples: 5
Max nTPM: 23.9
Min nTPM: 3.4
P10809_1005
6.6
P10809_1053
7.7
P10809_1072
23.9
P10809_1082
7.4
P10809_1109
3.4
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
57.0
Monaco sample
nTPM
Classical monocyte nTPM: 57.0
Samples: 4
Max nTPM: 70.5
Min nTPM: 51.0
RHH5313_R3680
54.9
RHH5221_R3593
51.0
RHH5250_R3622
51.5
RHH5279_R3651
70.5
Intermediate monocyte nTPM: 48.0
Samples: 4
Max nTPM: 58.7
Min nTPM: 42.0
RHH5314_R3681
42.0
RHH5222_R3594
45.0
RHH5251_R3623
46.1
RHH5280_R3652
58.7
Non-classical monocyte nTPM: 55.1
Samples: 4
Max nTPM: 65.7
Min nTPM: 42.6
RHH5315_R3682
42.6
RHH5223_R3595
65.7
RHH5252_R3624
53.6
RHH5281_R3653
58.4
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
84.0
Schmiedel sample id
TPM
Classical monocyte TPM: 77.3
Samples: 91
Max TPM: 98.5
Min TPM: 59.8
MONOCYTES_1
98.5
MONOCYTES_2
98.0
MONOCYTES_3
97.4
MONOCYTES_4
94.6
MONOCYTES_5
93.5
MONOCYTES_6
93.4
MONOCYTES_7
91.8
MONOCYTES_8
90.2
MONOCYTES_9
90.0
MONOCYTES_10
88.9
MONOCYTES_11
87.8
MONOCYTES_12
87.6
MONOCYTES_13
87.3
MONOCYTES_14
86.2
MONOCYTES_15
85.5
MONOCYTES_16
85.2
MONOCYTES_17
84.7
MONOCYTES_18
84.6
MONOCYTES_19
84.5
MONOCYTES_20
84.0
MONOCYTES_21
84.0
MONOCYTES_22
83.3
MONOCYTES_23
83.1
MONOCYTES_24
81.9
MONOCYTES_25
81.9
MONOCYTES_26
81.6
MONOCYTES_27
81.6
MONOCYTES_28
81.5
MONOCYTES_29
81.1
MONOCYTES_30
81.1
MONOCYTES_31
80.5
MONOCYTES_32
80.4
MONOCYTES_33
80.3
MONOCYTES_34
79.8
MONOCYTES_35
79.6
MONOCYTES_36
79.4
MONOCYTES_37
79.0
MONOCYTES_38
78.9
MONOCYTES_39
78.8
MONOCYTES_40
78.5
MONOCYTES_41
78.5
MONOCYTES_42
78.2
MONOCYTES_43
78.2
MONOCYTES_44
78.1
MONOCYTES_45
76.6
MONOCYTES_46
76.6
MONOCYTES_47
75.9
MONOCYTES_48
75.8
MONOCYTES_49
75.5
MONOCYTES_50
75.1
MONOCYTES_51
74.5
MONOCYTES_52
74.5
MONOCYTES_53
74.4
MONOCYTES_54
74.2
MONOCYTES_55
73.9
MONOCYTES_56
73.7
MONOCYTES_57
73.6
MONOCYTES_58
73.1
MONOCYTES_59
73.1
MONOCYTES_60
72.9
MONOCYTES_61
72.4
MONOCYTES_62
71.9
MONOCYTES_63
71.1
MONOCYTES_64
70.9
MONOCYTES_65
70.9
MONOCYTES_66
70.4
MONOCYTES_67
70.2
MONOCYTES_68
70.1
MONOCYTES_69
69.7
MONOCYTES_70
69.7
MONOCYTES_71
69.4
MONOCYTES_72
69.4
MONOCYTES_73
69.3
MONOCYTES_74
69.1
MONOCYTES_75
68.9
MONOCYTES_76
68.6
MONOCYTES_77
68.6
MONOCYTES_78
68.6
MONOCYTES_79
68.6
MONOCYTES_80
68.0
MONOCYTES_81
67.8
MONOCYTES_82
67.4
MONOCYTES_83
66.7
MONOCYTES_84
66.7
MONOCYTES_85
66.7
MONOCYTES_86
66.6
MONOCYTES_87
66.0
MONOCYTES_88
65.9
MONOCYTES_89
64.9
MONOCYTES_90
63.1
MONOCYTES_91
59.8
Show allShow less
Non-classical monocyte TPM: 84.0
Samples: 90
Max TPM: 112.5
Min TPM: 56.1
M2_1
112.5
M2_2
111.2
M2_3
109.6
M2_4
106.7
M2_5
106.7
M2_6
105.9
M2_7
105.4
M2_8
104.2
M2_9
103.7
M2_10
101.6
M2_11
101.5
M2_12
100.2
M2_13
99.8
M2_14
99.2
M2_15
97.8
M2_16
95.6
M2_17
95.1
M2_18
95.0
M2_19
93.7
M2_20
93.0
M2_21
92.7
M2_22
92.7
M2_23
92.0
M2_24
91.2
M2_25
90.9
M2_26
90.7
M2_27
90.3
M2_28
90.0
M2_29
88.6
M2_30
88.6
M2_31
88.5
M2_32
88.3
M2_33
88.1
M2_34
87.8
M2_35
87.2
M2_36
87.1
M2_37
86.9
M2_38
85.9
M2_39
85.6
M2_40
85.5
M2_41
85.3
M2_42
85.1
M2_43
85.1
M2_44
84.7
M2_45
84.5
M2_46
84.5
M2_47
84.4
M2_48
84.4
M2_49
83.9
M2_50
82.8
M2_51
82.4
M2_52
82.0
M2_53
81.9
M2_54
81.8
M2_55
81.3
M2_56
81.0
M2_57
80.7
M2_58
78.9
M2_59
78.6
M2_60
78.4
M2_61
78.4
M2_62
77.1
M2_63
76.7
M2_64
75.7
M2_65
75.5
M2_66
75.3
M2_67
74.9
M2_68
73.9
M2_69
73.3
M2_70
73.0
M2_71
72.0
M2_72
71.5
M2_73
71.1
M2_74
70.9
M2_75
70.9
M2_76
70.7
M2_77
70.6
M2_78
70.4
M2_79
70.3
M2_80
69.9
M2_81
67.4
M2_82
66.8
M2_83
66.6
M2_84
66.1
M2_85
65.5
M2_86
62.6
M2_87
61.3
M2_88
60.7
M2_89
60.1
M2_90
56.1
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.