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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • VIM
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:194.4 nTPM
GTEx:414.6 nTPM
FANTOM5:202.0 Scaled Tags Per Million
Macaque:51.8 nTPM
Pig:104.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.4
Sample id Sample description nTPM
Putamen
nTPM: 194.4
2482 Female, age 94, left hemisphere 297.2
2489 Female, age 72, unknown 246.3
1838 Male, age 80, right hemisphere 182.7
2647 Male, age 75, left hemisphere 172.3
1937 Female, age 91, right hemisphere 170.1
1829 Male, age 74, unknown 151.4
2466 Female, age 79, unknown 141.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

414.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 414.6
Samples: 254

Max nTPM: 3226.5
Min nTPM: 84.3
Std nTPM: 286.4
Median nTPM: 355.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 3226.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1990.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1343.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1305.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1199.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1075.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1026.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 922.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 904.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 884.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 821.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 804.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 801.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 772.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 763.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 757.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 756.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 749.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 737.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 736.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 715.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 694.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 692.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 687.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 685.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 678.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 674.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 671.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 668.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 664.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 663.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 649.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 634.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 629.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 622.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 617.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 612.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 606.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 589.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 584.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 574.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 566.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 566.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 560.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 555.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 553.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 547.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 546.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 544.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 538.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 522.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 521.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 515.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 508.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 497.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 493.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 492.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 492.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 486.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 486.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 484.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 482.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 481.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 479.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 479.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 476.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 474.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 470.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 469.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 468.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 465.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 462.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 459.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 459.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 456.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 455.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 451.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 450.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 448.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 443.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 438.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 431.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 430.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 429.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 426.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 420.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 418.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 417.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 417.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 411.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 411.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 411.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 411.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 408.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 407.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 406.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 405.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 404.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 402.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 401.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 400.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 397.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 395.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 393.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 391.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 389.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 386.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 386.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 385.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 384.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 382.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 381.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 381.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 380.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 377.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 377.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 370.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 366.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 365.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 365.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 363.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 362.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 362.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 358.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 358.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 356.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 355.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 355.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 354.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 353.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 351.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 351.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 349.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 344.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 343.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 343.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 342.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 342.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 341.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 341.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 334.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 333.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 330.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 330.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 326.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 326.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 324.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 324.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 323.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 322.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 322.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 321.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 319.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 317.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 316.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 316.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 314.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 310.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 308.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 308.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 307.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 307.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 304.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 304.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 303.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 303.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 301.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 300.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 299.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 298.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 297.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 297.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 295.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 294.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 293.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 290.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 287.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 287.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 283.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 282.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 281.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 279.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 275.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 274.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 274.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 271.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 270.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 269.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 268.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 266.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 265.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 264.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 261.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 261.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 259.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 256.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 249.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 249.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 247.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 247.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 246.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 240.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 240.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 238.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 236.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 235.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 235.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 235.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 233.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 232.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 231.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 229.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 227.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 225.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 222.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 215.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 214.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 214.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 213.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 212.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 210.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 210.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 207.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 202.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 196.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 189.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 189.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 188.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 187.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 186.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 185.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 185.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 184.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 180.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 179.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 178.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 176.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 167.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 166.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 162.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 153.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 153.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 150.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 145.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 144.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 141.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 135.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 130.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 129.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 125.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 120.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 103.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 90.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 84.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

202.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 202.0
FF:10176-103C5 60 years, female 202.0

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.8
Macaque sample Sample description nTPM
Putamen
nTPM: 51.8
Samples: 2

Max nTPM: 57.7
Min nTPM: 45.8
Sample A 57.7
Sample B 45.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.6
Pig sample Sample description nTPM
Putamen
nTPM: 104.6
Samples: 3

Max nTPM: 134.8
Min nTPM: 88.2
Sample B Female 88.2
Sample C Male 134.8
Sample D Male 90.9

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