A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
752.3
nTPM
Monaco:
3089.8
nTPM
Schmiedel:
1974.7
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
752.3
HPA sample
nTPM
Classical monocyte nTPM: 752.3
Samples: 6
Max nTPM: 1467.9
Min nTPM: 460.3
P10809_1003
1467.9
P10809_1020
694.4
P10809_1039
692.5
P10809_1058
596.7
P10809_1080
460.3
P10809_1107
602.1
Intermediate monocyte nTPM: 469.4
Samples: 6
Max nTPM: 646.4
Min nTPM: 261.9
P10809_1004
413.0
P10809_1023
547.6
P10809_1042
472.7
P10809_1061
646.4
P10809_1081
261.9
P10809_1108
474.6
Non-classical monocyte nTPM: 473.7
Samples: 5
Max nTPM: 725.6
Min nTPM: 245.5
P10809_1005
519.0
P10809_1053
407.0
P10809_1072
725.6
P10809_1082
245.5
P10809_1109
471.2
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
3089.8
Monaco sample
nTPM
Classical monocyte nTPM: 3089.8
Samples: 4
Max nTPM: 3776.4
Min nTPM: 2444.4
RHH5313_R3680
2994.1
RHH5221_R3593
3144.4
RHH5250_R3622
3776.4
RHH5279_R3651
2444.4
Intermediate monocyte nTPM: 1636.4
Samples: 4
Max nTPM: 2212.4
Min nTPM: 1287.3
RHH5314_R3681
1555.9
RHH5222_R3594
1287.3
RHH5251_R3623
2212.4
RHH5280_R3652
1489.8
Non-classical monocyte nTPM: 1320.9
Samples: 4
Max nTPM: 1717.4
Min nTPM: 1013.9
RHH5315_R3682
1428.2
RHH5223_R3595
1013.9
RHH5252_R3624
1717.4
RHH5281_R3653
1123.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1974.7
Schmiedel sample id
TPM
Classical monocyte TPM: 1974.7
Samples: 91
Max TPM: 2951.9
Min TPM: 1402.2
MONOCYTES_1
2951.9
MONOCYTES_2
2883.6
MONOCYTES_3
2856.2
MONOCYTES_4
2695.7
MONOCYTES_5
2670.3
MONOCYTES_6
2641.8
MONOCYTES_7
2623.3
MONOCYTES_8
2575.0
MONOCYTES_9
2498.8
MONOCYTES_10
2475.8
MONOCYTES_11
2447.2
MONOCYTES_12
2439.9
MONOCYTES_13
2414.3
MONOCYTES_14
2367.5
MONOCYTES_15
2348.8
MONOCYTES_16
2330.4
MONOCYTES_17
2310.3
MONOCYTES_18
2210.1
MONOCYTES_19
2208.1
MONOCYTES_20
2201.1
MONOCYTES_21
2190.9
MONOCYTES_22
2185.3
MONOCYTES_23
2170.2
MONOCYTES_24
2165.1
MONOCYTES_25
2154.3
MONOCYTES_26
2145.4
MONOCYTES_27
2138.5
MONOCYTES_28
2114.4
MONOCYTES_29
2105.5
MONOCYTES_30
2091.5
MONOCYTES_31
2089.5
MONOCYTES_32
2079.9
MONOCYTES_33
2074.5
MONOCYTES_34
2070.8
MONOCYTES_35
2066.9
MONOCYTES_36
2063.9
MONOCYTES_37
2036.0
MONOCYTES_38
2025.7
MONOCYTES_39
2006.2
MONOCYTES_40
1991.9
MONOCYTES_41
1974.8
MONOCYTES_42
1972.1
MONOCYTES_43
1958.6
MONOCYTES_44
1957.2
MONOCYTES_45
1953.8
MONOCYTES_46
1913.8
MONOCYTES_47
1906.1
MONOCYTES_48
1905.9
MONOCYTES_49
1889.5
MONOCYTES_50
1884.8
MONOCYTES_51
1881.0
MONOCYTES_52
1879.3
MONOCYTES_53
1875.3
MONOCYTES_54
1875.2
MONOCYTES_55
1857.2
MONOCYTES_56
1844.5
MONOCYTES_57
1799.1
MONOCYTES_58
1787.5
MONOCYTES_59
1775.0
MONOCYTES_60
1756.7
MONOCYTES_61
1741.0
MONOCYTES_62
1732.9
MONOCYTES_63
1725.8
MONOCYTES_64
1719.1
MONOCYTES_65
1717.7
MONOCYTES_66
1709.8
MONOCYTES_67
1701.2
MONOCYTES_68
1700.8
MONOCYTES_69
1698.1
MONOCYTES_70
1694.1
MONOCYTES_71
1678.6
MONOCYTES_72
1666.3
MONOCYTES_73
1640.6
MONOCYTES_74
1639.1
MONOCYTES_75
1615.3
MONOCYTES_76
1613.3
MONOCYTES_77
1606.5
MONOCYTES_78
1600.4
MONOCYTES_79
1595.8
MONOCYTES_80
1585.4
MONOCYTES_81
1551.9
MONOCYTES_82
1551.2
MONOCYTES_83
1541.7
MONOCYTES_84
1540.3
MONOCYTES_85
1539.3
MONOCYTES_86
1511.2
MONOCYTES_87
1500.1
MONOCYTES_88
1497.3
MONOCYTES_89
1476.6
MONOCYTES_90
1440.3
MONOCYTES_91
1402.2
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Non-classical monocyte TPM: 648.5
Samples: 90
Max TPM: 1166.0
Min TPM: 415.3
M2_1
1166.0
M2_2
950.6
M2_3
946.7
M2_4
934.2
M2_5
902.7
M2_6
893.3
M2_7
868.8
M2_8
843.0
M2_9
839.5
M2_10
795.9
M2_11
786.6
M2_12
780.3
M2_13
775.7
M2_14
767.1
M2_15
760.2
M2_16
758.3
M2_17
753.4
M2_18
752.0
M2_19
749.1
M2_20
744.5
M2_21
743.6
M2_22
742.9
M2_23
742.0
M2_24
735.8
M2_25
724.5
M2_26
700.9
M2_27
697.5
M2_28
692.0
M2_29
689.1
M2_30
684.1
M2_31
679.5
M2_32
671.8
M2_33
670.4
M2_34
670.3
M2_35
664.9
M2_36
664.1
M2_37
657.5
M2_38
656.2
M2_39
651.8
M2_40
650.0
M2_41
639.8
M2_42
633.0
M2_43
632.4
M2_44
629.2
M2_45
628.8
M2_46
628.3
M2_47
621.3
M2_48
617.5
M2_49
614.8
M2_50
613.7
M2_51
611.7
M2_52
610.0
M2_53
609.1
M2_54
606.1
M2_55
605.2
M2_56
596.2
M2_57
596.0
M2_58
593.6
M2_59
584.6
M2_60
584.3
M2_61
577.2
M2_62
575.9
M2_63
573.2
M2_64
563.4
M2_65
563.0
M2_66
558.8
M2_67
556.9
M2_68
555.4
M2_69
554.8
M2_70
553.7
M2_71
551.3
M2_72
546.0
M2_73
545.6
M2_74
536.9
M2_75
536.1
M2_76
524.7
M2_77
520.9
M2_78
514.8
M2_79
511.1
M2_80
495.9
M2_81
490.6
M2_82
487.8
M2_83
485.1
M2_84
479.3
M2_85
478.1
M2_86
464.3
M2_87
460.6
M2_88
441.0
M2_89
431.5
M2_90
415.3
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