On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
11.3
nTPM
HPA Brain:
87.0
nTPM
GTEx:
11.3
nTPM
Macaque:
73.1
nTPM
Mouse:
34.4
nTPM
Rat:
20.2
nTPM
Pig:
28.6
nTPM
HYPOTHALAMUS - SINGLE NUCLEI RNA EXPRESSIONi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NEURONSi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Unassigned AVP+
c-2
Excitatory (VGLUT2) TAC1+
c-3
Inhibitory (GAD1/2) AVP+
c-4
Unassigned AVP+
c-5
Excitatory (VGLUT2)
c-6
Excitatory (VGLUT2)
c-7
Inhibitory (GAD1/2) DRD2+ L...
c-8
Inhibitory (GAD1/2) ESR1+
c-9
Excitatory (VGLUT2)
c-10
Excitatory (VGLUT2) TAC1+
c-11
Inhibitory (GAD1/2) ESR1+
c-12
Inhibitory (GAD1/2) DRD1+ L...
c-13
Excitatory (VGLUT2)
c-14
Inhibitory (GAD1/2)
c-15
Excitatory (VGLUT2)
c-16
Excitatory (VGLUT2)
c-17
Inhibitory (GAD1/2)
c-18
Inhibitory (GAD1/2) GAL+
c-19
Excitatory (VGLUT1)
c-20
Excitatory (VGLUT2) ESR1+
c-21
Inhibitory (GAD1/2) DRD1+ L...
c-22
Inhibitory (GAD1/2) RORB+ K
c-23
Inhibitory (GAD1/2) SST+ NP
c-24
Inhibitory (GAD1/2) CXCL14+
c-25
Excitatory (VGLUT2)
c-26
Inhibitory (GAD1/2)
c-27
Excitatory (VGLUT2)
c-28
Unassigned
c-29
Inhibitory (GAD1/2) ESR1+
c-30
Excitatory (VGLUT2)
c-31
Excitatory (VGLUT1/2)
c-32
Inhibitory (GAD1/2) GAL+
c-33
Excitatory (VGLUT2)
c-34
Monoaminergic Inhibitory (G...
c-35
Excitatory (VGLUT2) TAC1+
c-36
Inhibitory (GAD1/2) LHX6+ T...
c-37
Excitatory (VGLUT2)
c-38
Inhibitory (GAD1/2) SST+
c-39
Inhibitory (GAD1/2) MEIS2+
c-40
Unassigned
c-41
Inhibitory (GAD1/2) SST+
c-42
Excitatory (VGLUT1)
c-43
Excitatory (VGLUT2) TAC1+
c-44
Unassigned AVP+
c-45
Inhibitory (GAD1/2) LAMP5+ ...
c-46
Excitatory (VGLUT2)
c-47
Inhibitory (GAD1/2) LHX6+ T...
c-48
Parvocellular CRH+ AVP+ OXT
c-49
Magnocellular TH+ AVP+ OXT+
c-50
Excitatory (VGLUT1)
c-51
Parvocellular (VGLUT2) AVP...
c-52
Inhibitory (GAD1/2) NOS1+ M...
c-53
Inhibitory (GAD1/2) TAC1+ D...
c-54
Inhibitory (GAD1/2) SST+
c-55
Excitatory (VGLUT1)
c-56
Excitatory (VGLUT1) ETV1+ Z...
c-57
HCRT+ RXF4+
c-58
Excitatory (VGLUT1/2) TAC1+
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NON-NEURONALi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Oligodendrocytes
c-2
Oligodendrocytes
c-3
Oligodendrocytes
c-4
Astrocytes (LHX2+)
c-5
Microglia
c-6
Oligodendrocytes
c-7
Astrocytes (CD44+)
c-8
Oligodendrocytes
c-9
Oligodendrocyte progenitor ...
c-10
Microglia
c-11
Oligodendrocytes
c-12
Astrocytes
c-13
Astrocytes (CD44+)
c-14
Oligodendrocyte progenitor ...
c-15
Oligodendrocyte progenitor ...
c-16
Microglia
c-17
Oligodendrocytes
c-18
Oligodendrocyte progenitor ...
c-19
Astrocytes
c-20
Fibroblasts
c-21
Oligodendrocytes
c-22
Oligodendrocytes
c-23
Ependymal cells
c-24
Vascular endothelial cells
c-25
Astrocytes (LHX2+)
c-26
Macrophages
c-27
Astrocytes
c-28
T-cells
c-29
Vascular smooth muscle cell
c-30
Fibroblasts (BNC2+ KCNMA1+ ...
c-31
Pericytes
c-32
Oligodendrocyte progenitor ...
c-33
Immature oligodendrocytes
c-34
Oligodendrocyte progenitor ...
c-35
NK-cells
c-36
Mural cells
c-37
Monocytes
c-38
Fibroblasts (BNC2+ TRPM3+)
c-39
Lymphocytes
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
87.0
Sample id
Sample description
nTPM
Arcuate nucleus nTPM: 38.2
2226
Male, age 75, left hemisphere
42.1
1961
Female, age 42, unknown
34.3
Dorsomedial nucleus nTPM: 53.6
2017
Female, age 42, unknown
67.1
2041
Female, age 72, unknown
51.8
1989
Male, age 62, unknown
41.9
Lateral hypothalamic area nTPM: 68.2
2228
Male, age 66, unknown
100.6
2412
Male, age 62, unknown
60.3
2271
Male, age 75, both hemispheres
60.1
1791
Male, age 80, right hemisphere
51.7
Mammillary body nTPM: 75.8
1834
Female, age 42, unknown
83.9
1948
Female, age 72, unknown
82.8
1945
Male, age 80, right hemisphere
80.0
1923
Female, age 72, unknown
70.0
2413
Male, age 66, unknown
62.3
Paraventricular nucleus nTPM: 87.0
2700
Male, age 62, unknown
87.0
Preoptic area nTPM: 73.2
2414
Female, age 72, unknown
90.0
1861
Female, age 42, unknown
66.3
1907
Male, age 80, right hemisphere
63.4
Supraoptic nucleus nTPM: 62.3
2043
Male, age 62, unknown
73.8
1894
Female, age 72, unknown
62.5
2835
Female, age 72, unknown
50.7
Ventromedial nucleus nTPM: 40.2
1982
Female, age 72, unknown
44.1
1822
Female, age 42, unknown
36.3
HYPOTHALAMUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.3
GTEx sample id
Sample description
nTPM
Brain - Hypothalamus Average nTPM: 11.3
Samples: 257
Max nTPM: 40.6
Min nTPM: 3.3
Std nTPM: 5.4
Median nTPM: 9.8
GTEX-11H98-0011-R8a-SM-5NQ8V
50-59 years, male
40.6
GTEX-WL46-0011-R8B-SM-H7OHG
50-59 years, male
36.5
GTEX-N7MS-0011-R8a-SM-2YUMK
60-69 years, male
32.3
GTEX-15DCD-0011-R8b-SM-7KUEF
70-79 years, female
31.3
GTEX-1QEPI-0011-R8a-SM-G8LLI
60-69 years, female
30.6
GTEX-1HBPH-0011-R8b-SM-CL556
40-49 years, female
30.4
GTEX-1H1CY-0011-R8b-SM-CJI31
60-69 years, female
26.3
GTEX-1QP6S-0011-R8a-SM-F649M
40-49 years, male
25.8
GTEX-1H3O1-0011-R8a-SM-CL555
60-69 years, male
24.0
GTEX-1IY9M-0011-R8a-SM-EYYWW
60-69 years, male
22.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW
50-59 years, male
22.6
GTEX-1F75A-0011-R8a-SM-CL539
50-59 years, male
22.5
GTEX-S7SE-0011-R8A-SM-F649T
50-59 years, male
22.4
GTEX-1RQED-0011-R8a-SM-G8LKO
60-69 years, male
21.7
GTEX-ZAB4-0011-R8b-SM-4SOKF
40-49 years, male
21.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT
50-59 years, male
21.1
GTEX-13FLW-0011-R8b-SM-5J1MZ
50-59 years, male
20.9
GTEX-11ZU8-0011-R8b-SM-GHWOM
60-69 years, male
19.9
GTEX-RVPV-0011-R8A-SM-F21II
60-69 years, male
19.7
GTEX-QDT8-0011-R8A-SM-G8W63
30-39 years, female
19.4
GTEX-P44H-0011-R8A-SM-2XCEL
40-49 years, male
19.2
GTEX-1JN6P-0011-R8a-SM-F6499
60-69 years, male
18.9
GTEX-11EMC-0011-R8b-SM-DO91Z
60-69 years, female
18.7
GTEX-1H23P-0011-R8b-SM-A9G1G
60-69 years, male
18.3
GTEX-15DYW-0011-R8b-SM-GRR3B
60-69 years, female
18.2
GTEX-T6MN-0011-R8A-SM-32QP3
50-59 years, male
18.2
GTEX-1CB4G-0011-R8b-SM-9WG7H
60-69 years, male
18.1
GTEX-1HBPI-0011-R8a-SM-A9G1S
50-59 years, male
17.9
GTEX-11TTK-0011-R8b-SM-DO111
60-69 years, female
17.8
GTEX-1H1DG-0011-R8a-SM-CL54Z
70-79 years, male
17.3
GTEX-Z93S-0011-R8a-SM-4RGNL
50-59 years, male
17.2
GTEX-X4XY-0011-R8A-SM-46MVC
60-69 years, male
16.9
GTEX-15G19-0011-R8b-SM-7KUL1
60-69 years, male
16.8
GTEX-WZTO-0011-R8A-SM-4E3II
40-49 years, male
16.5
GTEX-1HT8W-0011-R8b-SM-CM2SX
30-39 years, male
16.3
GTEX-17F97-0011-R8a-SM-7DUET
50-59 years, male
16.2
GTEX-1PWST-0011-R8a-SM-F3K5P
70-79 years, male
16.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4
60-69 years, male
15.9
GTEX-1B8SF-0011-R8b-SM-7P8SX
60-69 years, male
15.8
GTEX-1A8G6-0011-R8a-SM-7P8PD
60-69 years, male
15.6
GTEX-1OJC4-0011-R8a-SM-F3K5B
50-59 years, female
15.6
GTEX-1CAMQ-0011-R8a-SM-ARU85
40-49 years, male
15.5
GTEX-ZYY3-0011-R8a-SM-H7OHF
60-69 years, female
15.1
GTEX-12WSD-0011-R8b-SM-9QEGI
60-69 years, female
14.9
GTEX-145LU-0011-R8b-SM-5PNZG
50-59 years, male
14.8
GTEX-17EVP-0011-R8b-SM-7DUF9
40-49 years, male
14.8
GTEX-WWYW-0011-R8A-SM-3NB3S
50-59 years, female
14.8
GTEX-16YQH-0011-R8a-SM-7DUFB
30-39 years, male
14.5
GTEX-1CB4J-0011-R8a-SM-9QEHU
60-69 years, male
14.4
GTEX-145MH-0011-R8a-SM-5PNUL
50-59 years, male
14.2
GTEX-13112-0011-R8b-SM-664OV
50-59 years, male
14.1
GTEX-YJ89-0011-R8b-SM-4SOK8
60-69 years, male
13.9
GTEX-12WSA-0011-R8a-SM-5P9EX
60-69 years, male
13.6
GTEX-1B8SG-0011-R8b-SM-7IGNW
50-59 years, male
13.6
GTEX-1NV5F-0011-R8b-SM-F647Z
60-69 years, female
13.5
GTEX-1POEN-0011-R8b-SM-F647O
30-39 years, female
13.4
GTEX-1F6I4-0011-R8a-SM-9QEIA
60-69 years, male
13.3
GTEX-1IDJH-0011-R8b-SM-ARZLL
70-79 years, male
13.1
GTEX-11DXY-0011-R8a-SM-DO11M
60-69 years, male
13.0
GTEX-11DYG-0011-R8a-SM-DO93F
60-69 years, male
13.0
GTEX-145LS-0011-R8b-SM-5PNXA
60-69 years, female
13.0
GTEX-13X6J-0011-R8b-SM-5PNUA
50-59 years, male
12.6
GTEX-18465-0011-R8b-SM-7LG6O
50-59 years, male
12.6
GTEX-1EMGI-0011-R8b-SM-9QEID
60-69 years, male
12.6
GTEX-1JMQK-0011-R8a-SM-G8LMS
60-69 years, male
12.6
GTEX-1PPGY-0011-R8a-SM-F649R
60-69 years, male
12.6
GTEX-XMD1-0011-R8A-SM-4AT48
60-69 years, male
12.6
GTEX-14JIY-0011-R8a-SM-6AJAP
60-69 years, male
12.5
GTEX-15RJE-0011-R8a-SM-H7OGM
40-49 years, male
12.5
GTEX-1GN1V-0011-R8a-SM-CKZNV
60-69 years, male
12.5
GTEX-1N2EF-0011-R8a-SM-F6481
60-69 years, male
12.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA
70-79 years, male
12.4
GTEX-ZAK1-0011-R8a-SM-H7OGE
50-59 years, female
12.4
GTEX-131XH-0011-R8a-SM-5EGLL
50-59 years, male
12.3
GTEX-1JMPZ-0011-R8b-SM-F341A
30-39 years, male
12.3
GTEX-1P4AB-0011-R8a-SM-F341R
50-59 years, male
12.3
GTEX-1192X-0011-R8b-SM-DO11U
50-59 years, male
12.2
GTEX-11GS4-0011-R8b-SM-GI4XA
60-69 years, male
12.1
GTEX-14E7W-0011-R8b-SM-GQ1D6
70-79 years, male
12.0
GTEX-13SLX-0011-R8b-SM-5PNWZ
50-59 years, female
11.9
GTEX-1HB9E-0011-R8b-SM-A9G1O
50-59 years, male
11.9
GTEX-1B8L1-0011-R8b-SM-7P8ST
60-69 years, male
11.6
GTEX-1KWVE-0011-R8a-SM-F3K4V
30-39 years, male
11.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C
50-59 years, male
11.6
GTEX-1RLM8-0011-R8a-SM-EYYXR
50-59 years, male
11.6
GTEX-1F48J-0011-R8a-SM-9OSWW
50-59 years, female
11.5
GTEX-QMR6-0011-R8A-SM-32PKJ
50-59 years, male
11.5
GTEX-1C6VR-0011-R8b-SM-7MXUF
60-69 years, male
11.4
GTEX-16GPK-0011-R8a-SM-79OMQ
60-69 years, male
11.3
GTEX-1GF9W-0011-R8b-SM-9QEIR
60-69 years, male
11.3
GTEX-1B933-0011-R8a-SM-9QEGX
50-59 years, female
11.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT
50-59 years, male
11.2
GTEX-1MCQQ-0011-R8b-SM-F341H
60-69 years, male
11.2
GTEX-RNOR-0011-R8A-SM-EZ6MN
50-59 years, female
11.2
GTEX-16Z82-0011-R8a-SM-7DUEX
60-69 years, male
11.1
GTEX-1RDX4-0011-R8a-SM-G8LLT
50-59 years, female
11.1
GTEX-11ZUS-0011-R8a-SM-5BC73
30-39 years, male
11.0
GTEX-12ZZX-0011-R8a-SM-5DUW8
40-49 years, female
11.0
GTEX-14BMV-0011-R8a-SM-G9ERM
50-59 years, male
11.0
GTEX-1C64N-0011-R8b-SM-7MGXE
50-59 years, male
11.0
GTEX-1N5O9-0011-R8a-SM-F649C
60-69 years, male
11.0
GTEX-117XS-0011-R8b-SM-GHWOD
60-69 years, male
10.9
GTEX-144GL-0011-R8a-SM-5Q5B1
50-59 years, male
10.9
GTEX-14PJM-0011-R8b-SM-69LPD
50-59 years, female
10.9
GTEX-1GN73-0011-R8b-SM-CKZNY
60-69 years, male
10.9
GTEX-1HCU6-0011-R8a-SM-CJI3R
60-69 years, female
10.9
GTEX-X585-0011-R8A-SM-46MUX
50-59 years, male
10.9
GTEX-YFC4-0011-R8a-SM-4SOK3
40-49 years, female
10.9
GTEX-1B996-0011-R8b-SM-79OOS
60-69 years, male
10.8
GTEX-ZUA1-0011-R8b-SM-51MST
40-49 years, male
10.8
GTEX-12126-0011-R8a-SM-GI4WV
20-29 years, male
10.7
GTEX-11WQC-0011-R8b-SM-57WCH
60-69 years, male
10.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO
40-49 years, male
10.5
GTEX-1GN1U-0011-R8a-SM-CL537
50-59 years, female
10.4
GTEX-1MJK2-0011-R8a-SM-F341I
50-59 years, male
10.4
GTEX-1I1GS-0011-R8b-SM-CKZPE
60-69 years, male
10.3
GTEX-13NYB-0011-R8a-SM-5KM4R
40-49 years, male
10.2
GTEX-1F6IF-0011-R8a-SM-9OSX5
60-69 years, male
10.2
GTEX-1JN1M-0011-R8b-SM-F6485
60-69 years, female
10.2
GTEX-12696-0011-R8a-SM-GINAP
60-69 years, male
10.1
GTEX-1GTWX-0011-R8a-SM-CE6RM
60-69 years, male
10.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6
60-69 years, male
10.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ
60-69 years, male
10.0
GTEX-ZVT3-0011-R8b-SM-57WDJ
60-69 years, female
10.0
GTEX-11GSO-0011-R8b-SM-GJ3PM
60-69 years, male
9.9
GTEX-13OVL-0011-R8a-SM-5L3HH
50-59 years, male
9.9
GTEX-1HGF4-0011-R8b-SM-CKZP9
60-69 years, male
9.9
GTEX-11EI6-0011-R8a-SM-DO93M
60-69 years, male
9.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ
60-69 years, male
9.8
GTEX-1313W-0011-R8a-SM-5DUVM
50-59 years, female
9.7
GTEX-14DAQ-0011-R8a-SM-G9ERP
60-69 years, female
9.7
GTEX-15EO6-0011-R8a-SM-H6Q6R
50-59 years, male
9.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E
60-69 years, male
9.7
GTEX-14PN4-0011-R8a-SM-6EU1H
50-59 years, male
9.6
GTEX-1C6WA-0011-R8b-SM-7P8S7
60-69 years, male
9.6
GTEX-13X6K-0011-R8b-SM-5PNZ4
60-69 years, female
9.5
GTEX-1E1VI-0011-R8b-SM-ARU8E
50-59 years, male
9.5
GTEX-1LVA9-0011-R8a-SM-F3K5G
50-59 years, male
9.5
GTEX-1LVAO-0011-R8a-SM-F3K5J
60-69 years, male
9.5
GTEX-1R9K4-0011-R8b-SM-F649L
60-69 years, male
9.5
GTEX-14ASI-0011-R8b-SM-5S2UB
60-69 years, male
9.4
GTEX-1HSKV-0011-R8a-SM-CL54X
60-69 years, male
9.4
GTEX-1GF9V-0011-R8b-SM-CE6RB
60-69 years, male
9.3
GTEX-QVJO-0011-R8A-SM-447C7
60-69 years, female
9.3
GTEX-WVLH-0011-R8A-SM-3MJFC
50-59 years, male
9.3
GTEX-13FLV-0011-R8a-SM-5LZZE
50-59 years, male
9.2
GTEX-15ER7-0011-R8a-SM-7KUL2
20-29 years, female
9.2
GTEX-1JJEA-0011-R8a-SM-F3419
60-69 years, male
9.2
GTEX-1R9PO-0011-R8a-SM-F2TA3
60-69 years, female
9.2
GTEX-111FC-0011-R8b-SM-GI4VS
60-69 years, male
9.1
GTEX-1GZ4I-0011-R8b-SM-9WG76
50-59 years, male
9.1
GTEX-1N2DW-0011-R8a-SM-EY5YD
50-59 years, male
9.1
GTEX-PWO3-0011-R8A-SM-2I5GD
60-69 years, female
9.1
GTEX-11DZ1-0011-R8b-SM-DNZZI
50-59 years, male
9.0
GTEX-13OW6-0011-R8a-SM-5L3GF
50-59 years, male
9.0
GTEX-16XZZ-0011-R8b-SM-7LT8S
60-69 years, male
9.0
GTEX-1LSNL-0011-R8b-SM-F2TAH
50-59 years, male
9.0
GTEX-11GSP-0011-R8b-SM-5NQ79
60-69 years, female
8.9
GTEX-11ONC-0011-R8b-SM-5NQ87
60-69 years, male
8.9
GTEX-13CIG-0011-R8b-SM-5LZX5
50-59 years, male
8.9
GTEX-13QIC-0011-R8b-SM-5O9CV
60-69 years, female
8.9
GTEX-15CHQ-0011-R8b-SM-CNPO4
60-69 years, male
8.9
GTEX-17HG3-0011-R8a-SM-79OK7
30-39 years, female
8.9
GTEX-NPJ8-0011-R8a-SM-2HMLG
40-49 years, male
8.9
GTEX-WHSE-0011-R8A-SM-3P5Z1
20-29 years, male
8.9
GTEX-11OF3-0011-R8b-SM-57WCS
60-69 years, male
8.8
GTEX-15SHU-0011-R8a-SM-H6Q7V
40-49 years, female
8.8
GTEX-17EVQ-0011-R8a-SM-7189T
70-79 years, male
8.8
GTEX-17HII-0011-R8a-SM-79OK6
50-59 years, male
8.8
GTEX-11NV4-0011-R8b-SM-GHWO4
60-69 years, male
8.7
GTEX-14LZ3-0011-R8b-SM-COH3M
60-69 years, female
8.7
GTEX-1A3MX-0011-R8a-SM-7P8PI
60-69 years, male
8.7
GTEX-1RQEC-0011-R8b-SM-F648X
60-69 years, male
8.7
GTEX-13O3Q-0011-R8b-SM-5KM2J
50-59 years, male
8.6
GTEX-1GMR8-0011-R8a-SM-CKZNX
50-59 years, female
8.6
GTEX-1IKOH-0011-R8a-SM-A9SKG
60-69 years, female
8.5
GTEX-T5JC-0011-R8A-SM-32PLM
20-29 years, male
8.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K
50-59 years, female
8.5
GTEX-13G51-0011-R8b-SM-5LZZ4
60-69 years, male
8.4
GTEX-13OW7-0011-R8b-SM-5L3HR
50-59 years, male
8.4
GTEX-13QJC-0011-R8b-SM-5S2U6
60-69 years, female
8.4
GTEX-1A8G7-0011-R8a-SM-7P8S6
60-69 years, male
8.4
GTEX-1CB4H-0011-R8b-SM-CJI26
60-69 years, female
8.4
GTEX-1I1CD-0011-R8b-SM-CJI3X
60-69 years, female
8.4
GTEX-1IKK5-0011-R8b-SM-CJI45
60-69 years, male
8.4
GTEX-NL4W-0011-R8a-SM-2I3G4
50-59 years, male
8.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE
40-49 years, female
8.3
GTEX-QVUS-0011-R8A-SM-3GAD7
60-69 years, female
8.2
GTEX-132Q8-0011-R8b-SM-5DUWX
60-69 years, male
8.1
GTEX-13RTJ-0011-R8b-SM-5O9DL
60-69 years, male
8.1
GTEX-1F75W-0011-R8a-SM-9QEI4
60-69 years, male
8.1
GTEX-1KD4Q-0011-R8a-SM-F341N
40-49 years, male
8.1
GTEX-X261-0011-R8A-SM-4E3I5
50-59 years, male
8.1
GTEX-13N1W-0011-R8a-SM-5MR56
70-79 years, male
8.0
GTEX-1E2YA-0011-R8a-SM-CKZNG
50-59 years, male
8.0
GTEX-1GZHY-0011-R8b-SM-9OSWK
50-59 years, female
8.0
GTEX-1QMI2-0011-R8a-SM-F3429
60-69 years, male
8.0
GTEX-X4XX-0011-R8B-SM-46MWM
60-69 years, male
8.0
GTEX-147F4-0011-R8b-SM-5S2UN
50-59 years, male
7.9
GTEX-14PQA-0011-R8b-SM-6AJAB
50-59 years, female
7.9
GTEX-1LH75-0011-R8b-SM-F2TB2
50-59 years, female
7.9
GTEX-1399T-0011-R8b-SM-5IJD8
60-69 years, male
7.8
GTEX-1HFI6-0011-R8a-SM-ARZLP
40-49 years, male
7.8
GTEX-1KANB-0011-R8a-SM-F3K5N
50-59 years, male
7.8
GTEX-1CAV2-0011-R8a-SM-GRR24
40-49 years, female
7.6
GTEX-1MA7X-0011-R8a-SM-G9EQD
60-69 years, male
7.6
GTEX-13NYS-0011-R8a-SM-5MR5H
60-69 years, male
7.5
GTEX-13X6I-0011-R8a-SM-5PNZF
60-69 years, male
7.4
GTEX-13VXU-0011-R8b-SM-GJ3RR
50-59 years, male
7.3
GTEX-1LKK1-0011-R8a-SM-F341O
50-59 years, female
7.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J
60-69 years, male
7.3
GTEX-11ZTS-0011-R8a-SM-57WDI
60-69 years, female
7.2
GTEX-13CF2-0011-R8b-SM-5IJCX
60-69 years, male
7.2
GTEX-13OW5-0011-R8a-SM-5L3GQ
60-69 years, male
7.2
GTEX-14PJO-0011-R8a-SM-6AJAL
60-69 years, male
7.1
GTEX-1JMOU-0011-R8b-SM-F2TA9
60-69 years, female
7.0
GTEX-14C5O-0011-R8a-SM-5YYAG
60-69 years, male
6.9
GTEX-1I1HK-0011-R8b-SM-E8VN9
60-69 years, male
6.9
GTEX-1LSVX-0011-R8a-SM-F2TB3
60-69 years, male
6.9
GTEX-ZVZQ-0011-R8a-SM-51MR5
60-69 years, female
6.9
GTEX-ZXG5-0011-R8a-SM-57WD1
60-69 years, male
6.9
GTEX-131XW-0011-R8a-SM-5DUWY
50-59 years, female
6.7
GTEX-13JVG-0011-R8a-SM-5KM3E
60-69 years, male
6.7
GTEX-13FXS-0011-R8a-SM-5J1MN
50-59 years, male
6.6
GTEX-13O3O-0011-R8b-SM-5LUAL
60-69 years, female
6.6
GTEX-14753-0011-R8b-SM-5S2U1
60-69 years, male
6.6
GTEX-1F88E-0011-R8a-SM-CJI2H
60-69 years, female
6.6
GTEX-1N2EE-0011-R8a-SM-F3K4X
60-69 years, male
6.6
GTEX-117YW-0011-R8a-SM-GINAB
50-59 years, male
6.5
GTEX-11DXW-0011-R8a-SM-GIN8T
40-49 years, male
6.4
GTEX-13PDP-0011-R8b-SM-5O9CS
60-69 years, male
6.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS
50-59 years, male
6.4
GTEX-11O72-0011-R8a-SM-GJ3R9
40-49 years, male
6.3
GTEX-13SLW-0011-R8b-SM-5SI64
70-79 years, male
6.3
GTEX-1GN2E-0011-R8a-SM-CE6RK
60-69 years, male
6.3
GTEX-13OVJ-0011-R8b-SM-5L3FS
50-59 years, female
6.2
GTEX-ZDXO-0011-R8a-SM-4WWD7
60-69 years, male
6.2
GTEX-1BAJH-0011-R8a-SM-7MXUB
70-79 years, male
6.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ
50-59 years, male
6.0
GTEX-139TS-0011-R8a-SM-5J1NP
60-69 years, male
5.9
GTEX-13NZA-0011-R8b-SM-5KM2Q
60-69 years, male
5.9
GTEX-13OVH-0011-R8b-SM-5MR35
70-79 years, male
5.8
GTEX-13OW8-0011-R8a-SM-5L3G5
60-69 years, male
5.8
GTEX-16NPV-0011-R8a-SM-7EPH8
50-59 years, female
5.7
GTEX-ZF28-0011-R8a-SM-4WWFW
60-69 years, male
5.7
GTEX-1O9I2-0011-R8a-SM-F2TAX
50-59 years, male
5.6
GTEX-1477Z-0011-R8b-SM-5S2RG
60-69 years, male
5.4
GTEX-1HCVE-0011-R8a-SM-ARU7A
50-59 years, male
5.4
GTEX-1F52S-0011-R8a-SM-9OSXA
60-69 years, female
5.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG
60-69 years, female
5.1
GTEX-14BIL-0011-R8b-SM-69LQK
50-59 years, male
5.1
GTEX-1RAZS-0011-R8a-SM-F2TBI
50-59 years, male
5.0
GTEX-OXRN-0011-R8A-SM-E9TI1
50-59 years, male
4.9
GTEX-1445S-0011-R8a-SM-5PNWX
60-69 years, male
4.7
GTEX-1R46S-0011-R8a-SM-F3K4Q
60-69 years, female
4.5
GTEX-12WSM-0011-R8a-SM-5DUWJ
60-69 years, male
4.2
GTEX-11WQK-0011-R8a-SM-5BC7C
50-59 years, male
3.3
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HYPOTHALAMUS - Macaque RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
73.1
Macaque sample
Sample description
nTPM
Preoptic area nTPM: 73.1
Samples: 1
Max nTPM: 73.1
Min nTPM: 73.1
Sample A
73.1
HYPOTHALAMUS - Pig RNA-seqi
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
28.6
Pig sample
Sample description
nTPM
Hypothalamus nTPM: 28.6
Samples: 4
Max nTPM: 33.0
Min nTPM: 24.9
Sample A
Female
33.0
Sample B
Female
28.2
Sample C
Male
28.3
Sample D
Male
24.9
HYPOTHALAMUS - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.4
Mouse sample
Sample description
nTPM
Hypothalamus nTPM: 34.4
Samples: 4
Max nTPM: 36.9
Min nTPM: 30.2
Sample A
30.2
Sample B
36.9
Sample C
34.2
Sample D
36.3
HYPOTHALAMUS - Rat RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
20.2
Rat sample
Sample description
nTPM
Hypothalamus nTPM: 20.2
Samples: 4
Max nTPM: 20.9
Min nTPM: 19.0
Sample A
20.3
Sample A
20.9
Sample A
19.0
Sample A
20.6
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The Human Protein Atlas project is funded
