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  • TISSUE

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  • APBA2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:36.9 nTPM
HPA Brain:18.5 nTPM
GTEx:36.9 nTPM
Pig:37.3 nTPM
Mouse:59.0 nTPM
Allen mouse:6.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 15.5
1961 Female, age 42, unknown 18.9
2226 Male, age 75, left hemisphere 12.0
Dorsomedial nucleus
nTPM: 18.5
2017 Female, age 42, unknown 18.8
1989 Male, age 62, unknown 18.6
2041 Female, age 72, unknown 18.2
Lateral hypothalamic area
nTPM: 14.6
2271 Male, age 75, both hemispheres 21.0
2412 Male, age 62, unknown 15.1
1791 Male, age 80, right hemisphere 15.0
2228 Male, age 66, unknown 7.2
Mammillary body
nTPM: 15.1
1923 Female, age 72, unknown 18.0
1945 Male, age 80, right hemisphere 15.4
1948 Female, age 72, unknown 15.1
2413 Male, age 66, unknown 14.0
1834 Female, age 42, unknown 13.1
Paraventricular nucleus
nTPM: 15.7
2700 Male, age 62, unknown 15.7
Preoptic area
nTPM: 15.0
1861 Female, age 42, unknown 16.7
1907 Male, age 80, right hemisphere 14.6
2414 Female, age 72, unknown 13.7
Supraoptic nucleus
nTPM: 13.6
1894 Female, age 72, unknown 15.7
2835 Female, age 72, unknown 13.6
2043 Male, age 62, unknown 11.4
Ventromedial nucleus
nTPM: 15.4
1982 Female, age 72, unknown 16.8
1822 Female, age 42, unknown 14.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 36.9
Samples: 257

Max nTPM: 66.6
Min nTPM: 15.9
Std nTPM: 8.2
Median nTPM: 36.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 66.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 60.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 59.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 57.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 56.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 54.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 53.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 52.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 52.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 52.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 51.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 51.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 50.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 49.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 49.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 49.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 49.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 48.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 48.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 48.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 48.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 47.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 47.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 47.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 47.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 47.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 47.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 47.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 47.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 46.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 46.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 46.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 46.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 46.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 46.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 46.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 46.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 46.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 46.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 45.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 45.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 45.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 45.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 45.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 44.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 44.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 44.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 44.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 44.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 44.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 44.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 43.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 43.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 43.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 43.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 43.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 42.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 42.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 42.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 42.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 42.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 42.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 42.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 42.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 42.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 42.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 41.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 41.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 41.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 41.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 41.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 41.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 41.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 41.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 41.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 41.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 41.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 41.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 41.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 40.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 40.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 40.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 40.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 40.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 40.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 40.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 40.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 40.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 40.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 39.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 39.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 39.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 39.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 39.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 39.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 39.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 39.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 38.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 38.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 38.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 38.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 38.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 38.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 38.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 38.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 38.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 38.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 38.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 38.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 37.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 37.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 37.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 37.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 37.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 37.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 37.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 37.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 37.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 37.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 37.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 36.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 36.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 36.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 36.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 36.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 36.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 36.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 36.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 36.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 36.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 36.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 36.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 36.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 36.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 36.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 36.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 35.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 35.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 35.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 35.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 35.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 35.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 35.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 35.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 35.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 35.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 35.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 34.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 34.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 34.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 34.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 34.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 34.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 34.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 34.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 34.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 34.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 34.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 34.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 34.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 33.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 33.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 33.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 33.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 33.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 33.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 33.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 33.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 33.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 33.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 33.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 32.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 32.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 32.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 32.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 32.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 32.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 32.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 32.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 32.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 32.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 32.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 32.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 31.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 31.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 31.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 31.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 31.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 31.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 31.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 30.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 30.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 30.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 30.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 30.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 30.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 30.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 30.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 30.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 30.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 30.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 30.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 30.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 29.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 29.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 29.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 29.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 29.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 29.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 29.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 29.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 29.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 29.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 29.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 28.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 28.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 28.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 28.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 28.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 28.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 27.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 27.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 27.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 27.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 27.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 27.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 27.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 27.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 26.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 26.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 26.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 26.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 26.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 26.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 26.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 25.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 25.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 25.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 25.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 25.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 24.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 24.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 24.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 24.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 23.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 23.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 22.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 22.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 20.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 19.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 19.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 18.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 18.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 17.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 15.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 37.3
Samples: 4

Max nTPM: 44.6
Min nTPM: 28.8
Sample A Female 44.6
Sample B Female 41.0
Sample C Male 34.6
Sample D Male 28.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 59.0
Samples: 4

Max nTPM: 63.9
Min nTPM: 54.0
Sample A Male 63.9
Sample B Male 62.4
Sample C Female 54.0
Sample D Female 55.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.4
2031 Antisense, RP_Baylor_102630, Mouse strain C57BL/6J (56 days, male) 6.4
2032 Antisense, RP_Baylor_102630, Mouse strain C57BL/6J (56 days, male) 1.8

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