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  • TISSUE

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  • CTNNA1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:77.6 nTPM
HPA Brain:119.2 nTPM
GTEx:77.6 nTPM
Pig:48.2 nTPM
Mouse:55.5 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 66.5
2226 Male, age 75, left hemisphere 73.7
1961 Female, age 42, unknown 59.3
Dorsomedial nucleus
nTPM: 91.2
2017 Female, age 42, unknown 102.6
1989 Male, age 62, unknown 94.8
2041 Female, age 72, unknown 76.2
Lateral hypothalamic area
nTPM: 92.6
2271 Male, age 75, both hemispheres 110.9
2228 Male, age 66, unknown 99.1
1791 Male, age 80, right hemisphere 94.8
2412 Male, age 62, unknown 65.6
Mammillary body
nTPM: 119.2
1945 Male, age 80, right hemisphere 135.5
1834 Female, age 42, unknown 120.6
1948 Female, age 72, unknown 119.5
2413 Male, age 66, unknown 112.6
1923 Female, age 72, unknown 107.9
Paraventricular nucleus
nTPM: 98.5
2700 Male, age 62, unknown 98.5
Preoptic area
nTPM: 100.3
2414 Female, age 72, unknown 123.5
1861 Female, age 42, unknown 98.7
1907 Male, age 80, right hemisphere 78.5
Supraoptic nucleus
nTPM: 114.1
2043 Male, age 62, unknown 134.4
1894 Female, age 72, unknown 125.6
2835 Female, age 72, unknown 82.3
Ventromedial nucleus
nTPM: 65.4
1982 Female, age 72, unknown 69.5
1822 Female, age 42, unknown 61.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 77.6
Samples: 257

Max nTPM: 175.7
Min nTPM: 44.3
Std nTPM: 24.6
Median nTPM: 70.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 175.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 160.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 159.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 149.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 146.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 144.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 142.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 141.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 137.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 134.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 133.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 132.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 129.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 127.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 126.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 125.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 123.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 121.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 120.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 118.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 118.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 117.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 114.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 113.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 112.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 110.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 109.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 109.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 108.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 108.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 107.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 106.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 106.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 105.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 104.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 104.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 103.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 102.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 102.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 101.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 101.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 101.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 100.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 100.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 99.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 99.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 98.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 97.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 96.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 94.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 94.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 94.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 93.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 93.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 92.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 91.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 91.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 91.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 89.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 89.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 89.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 89.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 89.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 89.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 88.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 88.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 88.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 87.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 87.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 87.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 87.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 87.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 87.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 87.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 87.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 87.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 86.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 86.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 85.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 85.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 85.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 84.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 84.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 83.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 83.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 83.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 82.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 82.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 82.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 81.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 81.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 80.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 80.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 80.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 79.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 79.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 78.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 78.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 78.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 78.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 78.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 78.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 77.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 77.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 77.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 77.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 77.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 77.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 77.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 76.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 76.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 76.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 76.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 76.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 75.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 75.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 75.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 74.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 73.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 73.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 73.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 72.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 71.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 71.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 71.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 71.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 71.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 70.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 70.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 70.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 70.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 70.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 70.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 69.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 69.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 69.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 69.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 69.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 68.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 68.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 68.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 68.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 68.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 68.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 68.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 67.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 67.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 67.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 67.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 67.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 67.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 66.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 66.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 66.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 66.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 66.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 65.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 65.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 65.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 65.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 64.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 64.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 64.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 64.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 63.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 63.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 63.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 63.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 63.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 63.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 63.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 63.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 63.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 62.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 62.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 62.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 62.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 62.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 62.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 62.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 62.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 62.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 62.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 61.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 61.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 61.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 61.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 61.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 61.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 61.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 61.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 61.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 61.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 60.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 60.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 60.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 60.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 60.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 59.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 59.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 58.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 58.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 58.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 57.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 57.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 57.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 56.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 56.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 56.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 55.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 55.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 55.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 55.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 55.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 55.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 54.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 54.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 54.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 54.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 53.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 53.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 53.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 53.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 53.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 53.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 53.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 53.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 52.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 52.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 52.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 52.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 52.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 52.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 51.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 51.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 51.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 50.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 50.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 50.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 49.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 49.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 48.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 48.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 48.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 48.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 47.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 47.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 47.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 47.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 46.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 46.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 46.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 45.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 45.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 45.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 44.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 44.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 48.2
Samples: 4

Max nTPM: 56.3
Min nTPM: 31.6
Sample A Female 56.3
Sample B Female 50.3
Sample C Male 54.6
Sample D Male 31.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 55.6
Samples: 4

Max nTPM: 59.2
Min nTPM: 52.6
Sample A Male 52.6
Sample B Male 53.1
Sample C Female 57.3
Sample D Female 59.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.3
77455062 Antisense, RP_070129_02_A10, Mouse strain C57BL/6J (56 days, male) 0.3

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