A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
50.9
nTPM
Monaco:
108.7
nTPM
Schmiedel:
84.9
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
50.9
HPA sample
nTPM
Classical monocyte nTPM: 34.3
Samples: 6
Max nTPM: 58.9
Min nTPM: 19.1
P10809_1003
19.1
P10809_1020
27.3
P10809_1039
32.6
P10809_1058
58.9
P10809_1080
36.2
P10809_1107
31.6
Intermediate monocyte nTPM: 30.1
Samples: 6
Max nTPM: 43.1
Min nTPM: 21.2
P10809_1004
23.8
P10809_1023
21.2
P10809_1042
27.0
P10809_1061
39.0
P10809_1081
43.1
P10809_1108
26.4
Non-classical monocyte nTPM: 50.9
Samples: 5
Max nTPM: 124.2
Min nTPM: 17.8
P10809_1005
17.8
P10809_1053
24.8
P10809_1072
124.2
P10809_1082
54.4
P10809_1109
33.4
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
108.7
Monaco sample
nTPM
Classical monocyte nTPM: 87.7
Samples: 4
Max nTPM: 98.1
Min nTPM: 79.3
RHH5313_R3680
98.1
RHH5221_R3593
79.3
RHH5250_R3622
90.8
RHH5279_R3651
82.7
Intermediate monocyte nTPM: 99.7
Samples: 4
Max nTPM: 105.3
Min nTPM: 87.5
RHH5314_R3681
105.3
RHH5222_R3594
87.5
RHH5251_R3623
100.6
RHH5280_R3652
105.3
Non-classical monocyte nTPM: 108.7
Samples: 4
Max nTPM: 129.7
Min nTPM: 86.0
RHH5315_R3682
129.7
RHH5223_R3595
86.0
RHH5252_R3624
119.4
RHH5281_R3653
99.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
84.9
Schmiedel sample id
TPM
Classical monocyte TPM: 46.7
Samples: 91
Max TPM: 61.6
Min TPM: 32.6
MONOCYTES_1
61.6
MONOCYTES_2
61.0
MONOCYTES_3
58.9
MONOCYTES_4
58.1
MONOCYTES_5
57.7
MONOCYTES_6
57.4
MONOCYTES_7
57.1
MONOCYTES_8
56.4
MONOCYTES_9
54.9
MONOCYTES_10
54.7
MONOCYTES_11
54.5
MONOCYTES_12
54.4
MONOCYTES_13
54.4
MONOCYTES_14
54.1
MONOCYTES_15
54.1
MONOCYTES_16
53.7
MONOCYTES_17
53.5
MONOCYTES_18
53.3
MONOCYTES_19
53.1
MONOCYTES_20
52.6
MONOCYTES_21
52.5
MONOCYTES_22
52.3
MONOCYTES_23
51.4
MONOCYTES_24
51.2
MONOCYTES_25
50.3
MONOCYTES_26
50.3
MONOCYTES_27
49.7
MONOCYTES_28
49.2
MONOCYTES_29
49.0
MONOCYTES_30
49.0
MONOCYTES_31
49.0
MONOCYTES_32
48.8
MONOCYTES_33
48.8
MONOCYTES_34
48.5
MONOCYTES_35
47.9
MONOCYTES_36
47.8
MONOCYTES_37
47.8
MONOCYTES_38
47.6
MONOCYTES_39
47.5
MONOCYTES_40
47.3
MONOCYTES_41
47.2
MONOCYTES_42
47.1
MONOCYTES_43
46.7
MONOCYTES_44
46.5
MONOCYTES_45
46.5
MONOCYTES_46
46.2
MONOCYTES_47
46.2
MONOCYTES_48
46.1
MONOCYTES_49
45.3
MONOCYTES_50
45.0
MONOCYTES_51
44.9
MONOCYTES_52
44.7
MONOCYTES_53
44.5
MONOCYTES_54
44.0
MONOCYTES_55
43.8
MONOCYTES_56
43.8
MONOCYTES_57
43.8
MONOCYTES_58
43.7
MONOCYTES_59
43.6
MONOCYTES_60
43.5
MONOCYTES_61
43.4
MONOCYTES_62
43.3
MONOCYTES_63
43.3
MONOCYTES_64
42.7
MONOCYTES_65
42.7
MONOCYTES_66
42.6
MONOCYTES_67
42.6
MONOCYTES_68
42.3
MONOCYTES_69
41.9
MONOCYTES_70
41.6
MONOCYTES_71
41.6
MONOCYTES_72
41.6
MONOCYTES_73
41.6
MONOCYTES_74
41.3
MONOCYTES_75
40.6
MONOCYTES_76
40.6
MONOCYTES_77
40.3
MONOCYTES_78
40.1
MONOCYTES_79
40.1
MONOCYTES_80
40.0
MONOCYTES_81
39.6
MONOCYTES_82
39.5
MONOCYTES_83
39.4
MONOCYTES_84
39.2
MONOCYTES_85
39.0
MONOCYTES_86
38.7
MONOCYTES_87
38.7
MONOCYTES_88
38.2
MONOCYTES_89
34.6
MONOCYTES_90
34.4
MONOCYTES_91
32.6
Show allShow less
Non-classical monocyte TPM: 84.9
Samples: 90
Max TPM: 126.8
Min TPM: 44.4
M2_1
126.8
M2_2
122.6
M2_3
119.9
M2_4
118.5
M2_5
109.3
M2_6
108.8
M2_7
108.8
M2_8
108.3
M2_9
107.8
M2_10
106.4
M2_11
105.7
M2_12
105.1
M2_13
104.6
M2_14
103.1
M2_15
102.3
M2_16
101.5
M2_17
99.8
M2_18
96.9
M2_19
96.2
M2_20
95.9
M2_21
95.1
M2_22
95.0
M2_23
94.9
M2_24
91.8
M2_25
91.6
M2_26
90.9
M2_27
90.2
M2_28
89.0
M2_29
88.2
M2_30
88.1
M2_31
87.4
M2_32
86.9
M2_33
86.8
M2_34
86.8
M2_35
86.4
M2_36
86.4
M2_37
86.2
M2_38
85.6
M2_39
85.3
M2_40
85.1
M2_41
84.1
M2_42
83.9
M2_43
83.9
M2_44
82.6
M2_45
82.4
M2_46
82.3
M2_47
82.2
M2_48
82.0
M2_49
81.8
M2_50
81.6
M2_51
81.3
M2_52
80.6
M2_53
80.0
M2_54
79.4
M2_55
79.2
M2_56
79.1
M2_57
78.8
M2_58
78.7
M2_59
77.9
M2_60
77.8
M2_61
76.9
M2_62
76.7
M2_63
76.5
M2_64
76.3
M2_65
76.2
M2_66
75.0
M2_67
74.2
M2_68
74.0
M2_69
73.8
M2_70
73.2
M2_71
73.1
M2_72
72.7
M2_73
71.9
M2_74
71.9
M2_75
71.3
M2_76
71.1
M2_77
69.7
M2_78
69.4
M2_79
69.0
M2_80
68.8
M2_81
68.5
M2_82
68.3
M2_83
67.8
M2_84
67.4
M2_85
66.6
M2_86
66.0
M2_87
65.1
M2_88
64.9
M2_89
57.1
M2_90
44.4
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
