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BETA
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IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:0.8 nTPM
Monaco:7.0 nTPM
Schmiedel:22.8 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

0.8
HPA sample nTPM
Classical monocyte
nTPM: 0.9
Samples: 6

Max nTPM: 1.2
Min nTPM: 0.6
P10809_1003 0.9
P10809_1020 0.6
P10809_1039 0.7
P10809_1058 0.9
P10809_1080 1.2
P10809_1107 0.9
Intermediate monocyte
nTPM: 0.7
Samples: 6

Max nTPM: 1.5
Min nTPM: 0.0
P10809_1004 0.8
P10809_1023 1.2
P10809_1042 0.1
P10809_1061 0.0
P10809_1081 0.8
P10809_1108 1.5
Non-classical monocyte
nTPM: 0.7
Samples: 5

Max nTPM: 1.1
Min nTPM: 0.0
P10809_1005 0.5
P10809_1053 1.0
P10809_1072 0.0
P10809_1082 0.9
P10809_1109 1.1

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

7.0
Monaco sample nTPM
Classical monocyte
nTPM: 5.3
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.5
RHH5313_R3680 4.5
RHH5221_R3593 6.1
RHH5250_R3622 5.9
RHH5279_R3651 4.5
Intermediate monocyte
nTPM: 7.0
Samples: 4

Max nTPM: 8.6
Min nTPM: 4.5
RHH5314_R3681 4.5
RHH5222_R3594 8.4
RHH5251_R3623 8.6
RHH5280_R3652 6.4
Non-classical monocyte
nTPM: 4.8
Samples: 4

Max nTPM: 6.0
Min nTPM: 2.5
RHH5315_R3682 6.0
RHH5223_R3595 5.2
RHH5252_R3624 5.3
RHH5281_R3653 2.5

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

22.8
Schmiedel sample id TPM
Classical monocyte
TPM: 22.8
Samples: 91

Max TPM: 32.5
Min TPM: 15.0
MONOCYTES_1 32.5
MONOCYTES_2 32.4
MONOCYTES_3 29.6
MONOCYTES_4 29.1
MONOCYTES_5 28.8
MONOCYTES_6 28.5
MONOCYTES_7 28.3
MONOCYTES_8 27.8
MONOCYTES_9 27.8
MONOCYTES_10 27.4
MONOCYTES_11 27.0
MONOCYTES_12 26.7
MONOCYTES_13 26.7
MONOCYTES_14 26.0
MONOCYTES_15 25.6
MONOCYTES_16 25.5
MONOCYTES_17 25.3
MONOCYTES_18 25.3
MONOCYTES_19 25.1
MONOCYTES_20 25.0
MONOCYTES_21 25.0
MONOCYTES_22 24.9
MONOCYTES_23 24.8
MONOCYTES_24 24.7
MONOCYTES_25 24.6
MONOCYTES_26 24.5
MONOCYTES_27 24.4
MONOCYTES_28 24.3
MONOCYTES_29 24.3
MONOCYTES_30 24.3
MONOCYTES_31 24.2
MONOCYTES_32 23.7
MONOCYTES_33 23.7
MONOCYTES_34 23.5
MONOCYTES_35 23.5
MONOCYTES_36 23.4
MONOCYTES_37 23.4
MONOCYTES_38 23.3
MONOCYTES_39 23.2
MONOCYTES_40 23.1
MONOCYTES_41 23.0
MONOCYTES_42 23.0
MONOCYTES_43 22.9
MONOCYTES_44 22.8
MONOCYTES_45 22.8
MONOCYTES_46 22.7
MONOCYTES_47 22.4
MONOCYTES_48 22.3
MONOCYTES_49 22.3
MONOCYTES_50 22.2
MONOCYTES_51 22.1
MONOCYTES_52 22.0
MONOCYTES_53 22.0
MONOCYTES_54 22.0
MONOCYTES_55 21.9
MONOCYTES_56 21.9
MONOCYTES_57 21.9
MONOCYTES_58 21.7
MONOCYTES_59 21.7
MONOCYTES_60 21.5
MONOCYTES_61 21.4
MONOCYTES_62 21.4
MONOCYTES_63 20.8
MONOCYTES_64 20.7
MONOCYTES_65 20.5
MONOCYTES_66 20.5
MONOCYTES_67 20.4
MONOCYTES_68 20.3
MONOCYTES_69 20.2
MONOCYTES_70 20.1
MONOCYTES_71 20.0
MONOCYTES_72 19.9
MONOCYTES_73 19.6
MONOCYTES_74 19.5
MONOCYTES_75 19.2
MONOCYTES_76 19.0
MONOCYTES_77 19.0
MONOCYTES_78 19.0
MONOCYTES_79 18.9
MONOCYTES_80 18.9
MONOCYTES_81 18.8
MONOCYTES_82 18.8
MONOCYTES_83 18.8
MONOCYTES_84 18.7
MONOCYTES_85 18.5
MONOCYTES_86 18.5
MONOCYTES_87 18.2
MONOCYTES_88 18.0
MONOCYTES_89 17.2
MONOCYTES_90 16.0
MONOCYTES_91 15.0
Show allShow less
Non-classical monocyte
TPM: 21.5
Samples: 90

Max TPM: 31.8
Min TPM: 11.5
M2_1 31.8
M2_2 31.0
M2_3 30.2
M2_4 28.6
M2_5 27.8
M2_6 27.5
M2_7 27.4
M2_8 27.0
M2_9 26.9
M2_10 26.9
M2_11 26.8
M2_12 26.5
M2_13 26.4
M2_14 26.1
M2_15 26.1
M2_16 25.9
M2_17 25.6
M2_18 25.4
M2_19 25.1
M2_20 24.8
M2_21 24.5
M2_22 24.4
M2_23 24.4
M2_24 24.2
M2_25 24.0
M2_26 23.6
M2_27 23.6
M2_28 23.3
M2_29 23.2
M2_30 23.2
M2_31 23.1
M2_32 23.0
M2_33 22.9
M2_34 22.7
M2_35 22.7
M2_36 22.6
M2_37 22.4
M2_38 22.0
M2_39 21.6
M2_40 21.6
M2_41 21.6
M2_42 21.4
M2_43 21.4
M2_44 21.4
M2_45 21.3
M2_46 21.2
M2_47 21.2
M2_48 21.1
M2_49 21.0
M2_50 20.8
M2_51 20.5
M2_52 20.5
M2_53 20.4
M2_54 20.3
M2_55 20.2
M2_56 20.1
M2_57 20.0
M2_58 20.0
M2_59 19.9
M2_60 19.9
M2_61 19.7
M2_62 19.6
M2_63 19.5
M2_64 19.3
M2_65 19.3
M2_66 19.3
M2_67 19.2
M2_68 19.1
M2_69 18.9
M2_70 18.5
M2_71 18.4
M2_72 18.1
M2_73 18.1
M2_74 18.0
M2_75 17.8
M2_76 17.7
M2_77 17.1
M2_78 17.1
M2_79 16.4
M2_80 16.3
M2_81 15.8
M2_82 15.8
M2_83 15.8
M2_84 15.6
M2_85 15.0
M2_86 14.7
M2_87 14.7
M2_88 13.7
M2_89 12.8
M2_90 11.5
Show allShow less

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