A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
343.7
nTPM
Monaco:
687.7
nTPM
Schmiedel:
178.8
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
343.7
HPA sample
nTPM
Classical monocyte nTPM: 343.7
Samples: 6
Max nTPM: 448.3
Min nTPM: 283.0
P10809_1003
347.8
P10809_1020
383.7
P10809_1039
448.3
P10809_1058
283.0
P10809_1080
303.7
P10809_1107
295.6
Intermediate monocyte nTPM: 130.1
Samples: 6
Max nTPM: 144.7
Min nTPM: 97.9
P10809_1004
97.9
P10809_1023
139.2
P10809_1042
140.2
P10809_1061
144.7
P10809_1081
122.2
P10809_1108
136.1
Non-classical monocyte nTPM: 82.9
Samples: 5
Max nTPM: 108.2
Min nTPM: 59.8
P10809_1005
70.9
P10809_1053
99.9
P10809_1072
108.2
P10809_1082
59.8
P10809_1109
75.6
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
687.7
Monaco sample
nTPM
Classical monocyte nTPM: 687.7
Samples: 4
Max nTPM: 790.2
Min nTPM: 649.3
RHH5313_R3680
651.9
RHH5221_R3593
790.2
RHH5250_R3622
659.3
RHH5279_R3651
649.3
Intermediate monocyte nTPM: 250.8
Samples: 4
Max nTPM: 299.3
Min nTPM: 202.3
RHH5314_R3681
289.2
RHH5222_R3594
212.3
RHH5251_R3623
202.3
RHH5280_R3652
299.3
Non-classical monocyte nTPM: 178.2
Samples: 4
Max nTPM: 190.3
Min nTPM: 161.0
RHH5315_R3682
178.1
RHH5223_R3595
161.0
RHH5252_R3624
190.3
RHH5281_R3653
183.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
178.8
Schmiedel sample id
TPM
Classical monocyte TPM: 178.8
Samples: 91
Max TPM: 235.4
Min TPM: 140.9
MONOCYTES_1
235.4
MONOCYTES_2
227.9
MONOCYTES_3
225.3
MONOCYTES_4
219.5
MONOCYTES_5
217.0
MONOCYTES_6
216.4
MONOCYTES_7
216.3
MONOCYTES_8
213.9
MONOCYTES_9
210.6
MONOCYTES_10
208.6
MONOCYTES_11
204.6
MONOCYTES_12
203.9
MONOCYTES_13
201.1
MONOCYTES_14
200.2
MONOCYTES_15
200.1
MONOCYTES_16
199.2
MONOCYTES_17
198.7
MONOCYTES_18
198.6
MONOCYTES_19
198.4
MONOCYTES_20
196.8
MONOCYTES_21
196.8
MONOCYTES_22
195.7
MONOCYTES_23
195.2
MONOCYTES_24
194.8
MONOCYTES_25
194.4
MONOCYTES_26
192.8
MONOCYTES_27
189.9
MONOCYTES_28
187.4
MONOCYTES_29
186.8
MONOCYTES_30
186.6
MONOCYTES_31
185.6
MONOCYTES_32
185.2
MONOCYTES_33
184.7
MONOCYTES_34
182.7
MONOCYTES_35
182.6
MONOCYTES_36
182.5
MONOCYTES_37
182.4
MONOCYTES_38
180.7
MONOCYTES_39
179.1
MONOCYTES_40
179.0
MONOCYTES_41
178.2
MONOCYTES_42
178.1
MONOCYTES_43
177.7
MONOCYTES_44
176.7
MONOCYTES_45
176.1
MONOCYTES_46
176.0
MONOCYTES_47
175.7
MONOCYTES_48
175.0
MONOCYTES_49
174.1
MONOCYTES_50
173.2
MONOCYTES_51
172.5
MONOCYTES_52
171.8
MONOCYTES_53
171.5
MONOCYTES_54
170.6
MONOCYTES_55
169.9
MONOCYTES_56
169.8
MONOCYTES_57
169.0
MONOCYTES_58
168.0
MONOCYTES_59
167.9
MONOCYTES_60
167.5
MONOCYTES_61
167.1
MONOCYTES_62
165.9
MONOCYTES_63
165.8
MONOCYTES_64
165.3
MONOCYTES_65
165.2
MONOCYTES_66
165.1
MONOCYTES_67
164.8
MONOCYTES_68
164.1
MONOCYTES_69
164.1
MONOCYTES_70
164.0
MONOCYTES_71
163.7
MONOCYTES_72
163.3
MONOCYTES_73
161.6
MONOCYTES_74
161.2
MONOCYTES_75
158.7
MONOCYTES_76
157.8
MONOCYTES_77
157.7
MONOCYTES_78
157.4
MONOCYTES_79
157.0
MONOCYTES_80
156.6
MONOCYTES_81
155.9
MONOCYTES_82
152.4
MONOCYTES_83
152.1
MONOCYTES_84
151.3
MONOCYTES_85
149.9
MONOCYTES_86
148.2
MONOCYTES_87
147.4
MONOCYTES_88
145.1
MONOCYTES_89
144.6
MONOCYTES_90
142.0
MONOCYTES_91
140.9
Show allShow less
Non-classical monocyte TPM: 47.5
Samples: 90
Max TPM: 71.1
Min TPM: 33.6
M2_1
71.1
M2_2
67.8
M2_3
66.5
M2_4
65.3
M2_5
65.1
M2_6
63.5
M2_7
59.8
M2_8
59.8
M2_9
58.1
M2_10
57.1
M2_11
56.7
M2_12
55.5
M2_13
54.6
M2_14
54.0
M2_15
54.0
M2_16
53.8
M2_17
53.8
M2_18
53.6
M2_19
53.4
M2_20
53.2
M2_21
52.3
M2_22
52.1
M2_23
52.0
M2_24
51.9
M2_25
51.8
M2_26
51.3
M2_27
50.9
M2_28
50.4
M2_29
49.9
M2_30
49.7
M2_31
49.5
M2_32
49.5
M2_33
49.4
M2_34
49.4
M2_35
49.4
M2_36
49.3
M2_37
48.5
M2_38
48.5
M2_39
48.2
M2_40
48.1
M2_41
48.0
M2_42
47.5
M2_43
47.3
M2_44
47.3
M2_45
47.1
M2_46
47.0
M2_47
46.9
M2_48
46.8
M2_49
46.6
M2_50
46.4
M2_51
45.3
M2_52
45.2
M2_53
44.7
M2_54
44.2
M2_55
43.9
M2_56
43.8
M2_57
43.4
M2_58
43.4
M2_59
42.9
M2_60
42.7
M2_61
42.7
M2_62
42.5
M2_63
42.5
M2_64
42.2
M2_65
41.7
M2_66
41.6
M2_67
41.6
M2_68
41.4
M2_69
41.2
M2_70
41.1
M2_71
40.8
M2_72
40.3
M2_73
40.3
M2_74
40.1
M2_75
39.9
M2_76
39.6
M2_77
39.4
M2_78
39.3
M2_79
39.2
M2_80
38.9
M2_81
38.9
M2_82
38.8
M2_83
38.6
M2_84
38.5
M2_85
37.7
M2_86
35.7
M2_87
35.6
M2_88
34.6
M2_89
33.6
M2_90
33.6
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.