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BCAR1
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • BCAR1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

35.494
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:15.9 nTPM
HPA Brain:65.8 nTPM
GTEx:15.9 nTPM
Pig:19.4 nTPM
Mouse:17.5 nTPM
Allen mouse:1.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA042282
Hypothalamus mean intensity 35.494
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 28.749
Mammillary nucleus -
Periventricular hypothalamic nucleus 31.686
Supraoptic nucleus 35.458
Tuberal nucleus 21.509
Ventral tuberomammillary nucleus 19.379
Lateral preoptic area 18.951
Medial preoptic area 11.839
Suprachiasmatic nucleus 32.083
Paraventricular hypothalamic nucleus 11.275
Anterior hypothalamic area, central 20.738
Ventral medial hypothalamic nucleus 24.710
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 32.838
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 23.608
Dorsal medial hypothalamic nucleus 35.494
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 34.6
1961 Female, age 42, unknown 35.9
2226 Male, age 75, left hemisphere 33.3
Dorsomedial nucleus
nTPM: 41.0
2017 Female, age 42, unknown 47.4
1989 Male, age 62, unknown 40.4
2041 Female, age 72, unknown 35.4
Lateral hypothalamic area
nTPM: 41.0
2228 Male, age 66, unknown 55.0
2412 Male, age 62, unknown 37.4
1791 Male, age 80, right hemisphere 37.0
2271 Male, age 75, both hemispheres 34.4
Mammillary body
nTPM: 46.0
1834 Female, age 42, unknown 48.1
1923 Female, age 72, unknown 46.9
1948 Female, age 72, unknown 46.0
2413 Male, age 66, unknown 44.8
1945 Male, age 80, right hemisphere 44.3
Paraventricular nucleus
nTPM: 65.8
2700 Male, age 62, unknown 65.8
Preoptic area
nTPM: 41.2
1861 Female, age 42, unknown 44.2
2414 Female, age 72, unknown 44.1
1907 Male, age 80, right hemisphere 35.2
Supraoptic nucleus
nTPM: 40.2
2835 Female, age 72, unknown 49.7
2043 Male, age 62, unknown 41.7
1894 Female, age 72, unknown 29.2
Ventromedial nucleus
nTPM: 34.6
1822 Female, age 42, unknown 35.3
1982 Female, age 72, unknown 33.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 15.9
Samples: 257

Max nTPM: 37.6
Min nTPM: 5.8
Std nTPM: 4.8
Median nTPM: 15.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 37.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 34.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 32.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 32.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 32.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 29.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 29.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 26.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 24.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 24.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 24.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 24.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 23.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 23.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 23.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 23.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 23.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 22.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 22.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 22.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 22.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 22.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 22.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 22.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 22.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 22.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 21.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 21.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 21.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 21.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 21.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 21.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 20.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 20.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 20.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 20.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 20.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 20.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 19.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 19.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 19.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 19.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 19.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 19.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 19.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 19.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 19.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 19.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 19.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 19.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 19.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 19.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 18.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 18.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 18.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 18.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 18.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 18.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 18.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 18.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 18.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 18.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 18.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 18.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 18.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 18.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 18.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 18.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 18.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 18.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 18.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 18.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 17.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 17.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 17.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 17.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 17.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 17.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 17.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 17.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 17.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 17.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 17.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 17.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 17.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 17.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 17.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 17.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 17.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 17.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 17.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 17.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 17.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 17.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 16.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 16.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 16.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 16.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 16.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 16.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 16.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 16.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 16.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 16.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 16.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 16.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 16.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 16.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 16.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 16.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 16.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 16.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 16.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 16.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 16.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 16.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 16.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 16.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 16.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 16.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 16.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 15.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 15.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 15.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 15.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 15.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 15.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 15.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 15.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 15.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 15.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 15.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 15.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 15.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 15.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 15.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 15.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 15.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 15.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 15.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 15.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 15.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 14.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 14.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 14.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 14.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 14.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 14.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 14.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 14.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 14.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 14.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 14.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 14.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 14.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 14.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 14.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 14.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 14.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 14.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 14.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 14.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 13.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 13.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 13.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 13.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 13.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 13.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 13.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 13.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 13.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 13.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 13.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 13.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 13.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 13.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 13.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 13.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 13.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 13.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 12.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 12.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 12.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 12.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 12.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 12.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 12.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 12.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 12.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 12.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 12.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 12.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 12.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 12.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 12.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 12.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 12.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 12.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 12.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 12.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 12.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 12.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 12.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 11.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 11.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 11.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 11.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 11.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 11.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 11.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 11.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 11.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 11.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 11.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 11.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 11.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 11.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 11.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 11.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 11.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 11.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 10.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 10.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 10.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 10.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 10.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 10.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 10.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 10.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 10.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 10.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 10.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 10.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 10.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 9.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 9.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 9.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 9.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 9.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 9.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 9.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 9.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 9.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 8.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 8.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 8.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 8.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 8.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 7.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 7.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 7.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 7.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 7.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 6.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 5.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 19.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 16.3
Sample A Female 23.7
Sample B Female 17.6
Sample C Male 19.8
Sample D Male 16.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 17.5
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.6
Sample A Male 19.0
Sample B Male 19.6
Sample C Female 15.9
Sample D Female 15.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.7
71656769 Antisense, RP_050927_04_C08, Mouse strain C57BL/6J (56 days, male) 1.7

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