HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1.9 nTPM
HPA Brain:18.6 nTPM
GTEx:1.9 nTPM
FANTOM5:24.3 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:3.8 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037485
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 18.6
Sample id Sample description nTPM
Hippocampus
nTPM: 16.1
1911 Female, age 85, right hemisphere 17.6
2148 Female, age 91, left hemisphere 16.7
1855 Male, age 76, left hemisphere 16.5
2529 Female, age 94, left hemisphere 16.5
2621 Female, age 67, right hemisphere 15.9
1898 Male, age 80, left hemisphere 13.5
Dentate gyrus
nTPM: 16.4
2531 Female, age 67, both hemispheres 18.7
2528 Male, age 74, both hemispheres 17.9
1927 Female, age 91, both hemispheres 17.0
2010 Male, age 76, both hemispheres 15.4
2246 Female, age 85, both hemispheres 15.1
2530 Female, age 94, left hemisphere 14.5
Entorhinal gyrus
nTPM: 16.8
2613 Female, age 94, left hemisphere 19.9
2117 Female, age 91, right hemisphere 18.1
1938 Female, age 85, left hemisphere 17.0
1787 Male, age 76, left hemisphere 16.4
2686 Male, age 75, right hemisphere 16.3
2764 Male, age 80, right hemisphere 13.3
Hippocampus, CA1
nTPM: 15.3
2082 Female, age 91, right hemisphere 16.7
2527 Male, age 74, both hemispheres 15.4
1873 Female, age 85, both hemispheres 15.1
2045 Male, age 76, both hemispheres 14.7
2749 Male, age 80, left hemisphere 14.5
Hippocampus, CA2
nTPM: 15.5
2113 Female, age 91, right hemisphere 17.1
1940 Female, age 85, left hemisphere 16.1
2249 Male, age 74, both hemispheres 15.5
1892 Male, age 76, both hemispheres 15.1
1963 Male, age 80, left hemisphere 15.0
2437 Female, age 94, left hemisphere 14.4
Hippocampus, CA3
nTPM: 18.6
2620 Female, age 94, left hemisphere 24.5
2436 Male, age 74, both hemispheres 20.4
1891 Female, age 85, both hemispheres 19.0
2861 Female, age 67, both hemispheres 17.7
2137 Male, age 80, left hemisphere 16.7
1867 Male, age 76, both hemispheres 13.3
Parahippocampal cortex
nTPM: 18.6
2693 Female, age 94, both hemispheres 26.8
2622 Female, age 67, right hemisphere 19.5
2532 Female, age 72, left hemisphere 19.3
1850 Male, age 80, both hemispheres 18.2
1990 Female, age 91, right hemisphere 18.0
2250 Female, age 67, right hemisphere 17.9
2245 Female, age 91, both hemispheres 17.8
2018 Male, age 76, both hemispheres 17.0
2692 Male, age 74, both hemispheres 15.8
1933 Female, age 85, both hemispheres 15.3
Perirhinal gyrus
nTPM: 18.5
2521 Female, age 94, right hemisphere 20.5
2848 Male, age 76, right hemisphere 19.3
1841 Female, age 85, right hemisphere 19.2
1794 Male, age 80, right hemisphere 17.8
1847 Female, age 91, left hemisphere 15.9
Subiculum
nTPM: 16.5
2438 Female, age 94, left hemisphere 22.4
2729 Female, age 91, right hemisphere 17.6
1977 Female, age 85, both hemispheres 15.7
1901 Male, age 80, both hemispheres 15.4
2042 Male, age 76, both hemispheres 14.0
2619 Male, age 74, both hemispheres 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.9
Samples: 255

Max nTPM: 3.9
Min nTPM: 0.3
Std nTPM: 0.6
Median nTPM: 1.8
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 3.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 3.9
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 3.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 3.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 3.5
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 3.5
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 3.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 3.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 3.3
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 3.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 3.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.3
FF:10153-102I9 76 years, female 24.7
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.2
Pig sample Sample description nTPM
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 13.5
Min nTPM: 11.2
Sample A Female 13.5
Sample B Female 11.9
Sample C Male 11.2
Sample D Male 12.0
Dorsal hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 13.3
Min nTPM: 11.3
Sample A Female 11.3
Sample B Female 12.1
Sample C Male 12.2
Sample D Male 13.3
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.7
Min nTPM: 12.4
Sample A Female 12.4
Sample B Female 14.7
Sample C Male 13.2
Sample D Male 12.6
Ventral hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.2
Sample A Female 11.8
Sample B Female 12.6
Sample C Male 10.2
Sample D Male 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 3.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.3
Sample A Male 4.4
Sample B Male 3.8
Sample C Female 3.3
Sample D Female 3.7
Hippocampal formation
nTPM: 3.5
Samples: 4

Max nTPM: 4.2
Min nTPM: 3.0
Sample A Male 3.5
Sample B Male 4.2
Sample C Female 3.2
Sample D Female 3.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70300403 Antisense, RP_050607_01_D09, Mouse strain C57BL/6J (56 days, male) 0.6

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