HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.3 nTPM
HPA Brain:70.8 nTPM
GTEx:53.3 nTPM
FANTOM5:97.0 Scaled Tags Per Million
Pig:75.3 nTPM
Mouse:124.5 nTPM
Allen mouse:3.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056127
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 70.8
Sample id Sample description nTPM
Hippocampus
nTPM: 53.7
1898 Male, age 80, left hemisphere 66.6
1911 Female, age 85, right hemisphere 59.6
2621 Female, age 67, right hemisphere 58.4
1855 Male, age 76, left hemisphere 52.7
2148 Female, age 91, left hemisphere 43.2
2529 Female, age 94, left hemisphere 41.8
Dentate gyrus
nTPM: 67.4
2010 Male, age 76, both hemispheres 95.0
2530 Female, age 94, left hemisphere 92.2
2246 Female, age 85, both hemispheres 68.2
2528 Male, age 74, both hemispheres 58.4
1927 Female, age 91, both hemispheres 54.2
2531 Female, age 67, both hemispheres 36.6
Entorhinal gyrus
nTPM: 47.5
1938 Female, age 85, left hemisphere 63.2
2686 Male, age 75, right hemisphere 48.9
1787 Male, age 76, left hemisphere 48.1
2764 Male, age 80, right hemisphere 46.6
2613 Female, age 94, left hemisphere 41.3
2117 Female, age 91, right hemisphere 36.6
Hippocampus, CA1
nTPM: 70.8
2749 Male, age 80, left hemisphere 101.7
1873 Female, age 85, both hemispheres 88.5
2045 Male, age 76, both hemispheres 85.1
2527 Male, age 74, both hemispheres 40.7
2082 Female, age 91, right hemisphere 38.0
Hippocampus, CA2
nTPM: 57.0
2249 Male, age 74, both hemispheres 70.7
1892 Male, age 76, both hemispheres 68.6
1963 Male, age 80, left hemisphere 64.2
2437 Female, age 94, left hemisphere 56.2
1940 Female, age 85, left hemisphere 47.4
2113 Female, age 91, right hemisphere 34.8
Hippocampus, CA3
nTPM: 52.8
2137 Male, age 80, left hemisphere 67.1
1867 Male, age 76, both hemispheres 62.0
1891 Female, age 85, both hemispheres 50.5
2436 Male, age 74, both hemispheres 48.9
2861 Female, age 67, both hemispheres 47.2
2620 Female, age 94, left hemisphere 41.4
Parahippocampal cortex
nTPM: 52.1
1933 Female, age 85, both hemispheres 70.8
2622 Female, age 67, right hemisphere 62.7
2693 Female, age 94, both hemispheres 62.7
2250 Female, age 67, right hemisphere 61.9
2532 Female, age 72, left hemisphere 54.2
1850 Male, age 80, both hemispheres 51.6
2245 Female, age 91, both hemispheres 42.5
1990 Female, age 91, right hemisphere 39.9
2018 Male, age 76, both hemispheres 38.2
2692 Male, age 74, both hemispheres 36.9
Perirhinal gyrus
nTPM: 51.1
2521 Female, age 94, right hemisphere 62.1
1841 Female, age 85, right hemisphere 54.9
1794 Male, age 80, right hemisphere 46.5
1847 Female, age 91, left hemisphere 46.1
2848 Male, age 76, right hemisphere 45.7
Subiculum
nTPM: 49.1
1977 Female, age 85, both hemispheres 66.4
2042 Male, age 76, both hemispheres 64.4
1901 Male, age 80, both hemispheres 47.6
2729 Female, age 91, right hemisphere 41.8
2438 Female, age 94, left hemisphere 39.0
2619 Male, age 74, both hemispheres 35.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 53.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.3
Samples: 255

Max nTPM: 180.7
Min nTPM: 11.2
Std nTPM: 23.2
Median nTPM: 48.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 180.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 168.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 116.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 116.2
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 115.1
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 109.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 104.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 102.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 101.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 94.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 94.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 97.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.0
FF:10169-103B7 60 years, female 135.0
FF:10153-102I9 76 years, female 59.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 75.3
Pig sample Sample description nTPM
Subiculum
nTPM: 75.4
Samples: 4

Max nTPM: 83.6
Min nTPM: 68.2
Sample A Female 83.6
Sample B Female 80.4
Sample C Male 69.2
Sample D Male 68.2
Dorsal hippocampus
nTPM: 73.3
Samples: 4

Max nTPM: 91.7
Min nTPM: 52.9
Sample A Female 91.7
Sample B Female 80.6
Sample C Male 68.0
Sample D Male 52.9
Entorhinal cortex
nTPM: 60.4
Samples: 4

Max nTPM: 75.8
Min nTPM: 46.1
Sample A Female 57.5
Sample B Female 75.8
Sample C Male 62.2
Sample D Male 46.1
Ventral hippocampus
nTPM: 73.3
Samples: 4

Max nTPM: 84.5
Min nTPM: 65.9
Sample A Female 84.5
Sample B Female 76.0
Sample C Male 65.9
Sample D Male 66.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 124.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 124.4
Samples: 4

Max nTPM: 131.3
Min nTPM: 116.8
Sample A Male 126.7
Sample B Male 131.3
Sample C Female 122.9
Sample D Female 116.8
Hippocampal formation
nTPM: 112.2
Samples: 4

Max nTPM: 139.6
Min nTPM: 99.7
Sample A Male 139.6
Sample B Male 101.5
Sample C Female 99.7
Sample D Female 108.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
70439123 Antisense, RP_050614_03_C01, Mouse strain C57BL/6J (56 days, male) 4.0
74750020 Antisense, RP_060220_05_E10, Mouse strain C57BL/6J (56 days, male) 2.6

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