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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:198.8 nTPM
HPA Brain:198.9 nTPM
GTEx:198.8 nTPM
Pig:659.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 153.5
1961 Female, age 42, unknown 178.9
2226 Male, age 75, left hemisphere 128.1
Dorsomedial nucleus
nTPM: 113.3
2041 Female, age 72, unknown 206.4
2017 Female, age 42, unknown 106.0
1989 Male, age 62, unknown 27.4
Lateral hypothalamic area
nTPM: 84.0
2412 Male, age 62, unknown 102.0
2228 Male, age 66, unknown 101.4
1791 Male, age 80, right hemisphere 67.9
2271 Male, age 75, both hemispheres 64.7
Mammillary body
nTPM: 26.5
1948 Female, age 72, unknown 36.5
1834 Female, age 42, unknown 27.0
1945 Male, age 80, right hemisphere 27.0
1923 Female, age 72, unknown 23.2
2413 Male, age 66, unknown 18.7
Paraventricular nucleus
nTPM: 149.9
2700 Male, age 62, unknown 149.9
Preoptic area
nTPM: 105.5
1861 Female, age 42, unknown 129.3
1907 Male, age 80, right hemisphere 124.6
2414 Female, age 72, unknown 62.6
Supraoptic nucleus
nTPM: 102.5
1894 Female, age 72, unknown 123.9
2835 Female, age 72, unknown 100.2
2043 Male, age 62, unknown 83.5
Ventromedial nucleus
nTPM: 198.9
1822 Female, age 42, unknown 218.7
1982 Female, age 72, unknown 179.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 198.8
Samples: 257

Max nTPM: 1817.8
Min nTPM: 4.8
Std nTPM: 169.2
Median nTPM: 178.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1817.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1189.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 896.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 692.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 588.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 477.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 461.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 446.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 418.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 410.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 409.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 409.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 406.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 402.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 402.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 396.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 390.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 384.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 383.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 382.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 377.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 372.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 368.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 362.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 359.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 359.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 359.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 356.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 355.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 348.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 345.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 344.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 333.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 326.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 323.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 322.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 320.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 317.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 306.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 302.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 300.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 296.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 291.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 290.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 288.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 285.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 284.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 282.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 281.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 280.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 280.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 275.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 273.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 273.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 266.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 265.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 264.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 261.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 259.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 258.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 256.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 253.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 253.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 252.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 248.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 248.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 248.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 246.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 245.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 240.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 239.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 237.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 237.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 237.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 234.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 234.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 233.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 233.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 232.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 231.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 230.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 227.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 227.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 226.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 220.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 219.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 218.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 217.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 217.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 215.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 214.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 214.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 212.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 212.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 209.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 207.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 206.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 205.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 204.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 203.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 203.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 202.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 202.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 202.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 202.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 200.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 200.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 198.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 197.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 196.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 196.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 195.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 193.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 192.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 189.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 189.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 188.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 188.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 188.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 186.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 185.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 184.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 184.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 181.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 181.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 179.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 179.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 179.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 178.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 175.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 172.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 170.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 169.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 169.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 168.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 168.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 167.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 166.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 166.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 165.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 163.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 163.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 163.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 162.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 162.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 162.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 161.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 160.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 159.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 158.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 158.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 156.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 154.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 149.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 148.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 147.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 145.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 144.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 143.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 142.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 142.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 142.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 136.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 134.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 132.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 132.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 131.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 129.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 129.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 128.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 126.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 126.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 125.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 122.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 121.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 119.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 117.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 112.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 112.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 112.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 110.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 109.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 109.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 109.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 106.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 105.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 103.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 101.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 101.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 101.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 100.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 100.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 97.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 96.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 96.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 95.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 95.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 93.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 92.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 91.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 91.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 90.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 89.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 88.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 87.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 87.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 86.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 82.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 80.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 80.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 78.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 77.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 75.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 75.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 73.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 73.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 73.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 71.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 69.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 69.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 68.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 66.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 63.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 61.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 60.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 57.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 57.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 57.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 56.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 56.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 55.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 55.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 54.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 54.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 53.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 47.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 46.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 46.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 42.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 42.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 39.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 34.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 33.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 30.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 29.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 28.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 26.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 26.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 25.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 19.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 17.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 15.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 13.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 12.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 10.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 9.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 4.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

659.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 659.7
Samples: 4

Max nTPM: 850.8
Min nTPM: 403.0
Sample A Female 578.3
Sample B Female 403.0
Sample C Male 850.8
Sample D Male 806.5

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