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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expression
Hypothalamusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Not detected
Synapses: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:157.2 nTPM
HPA Brain:554.3 nTPM
GTEx:157.2 nTPM
Pig:89.4 nTPM
Mouse:273.5 nTPM
Allen mouse:19.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA007179
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Not detected
Synapses High

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

554.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 554.3
2226 Male, age 75, left hemisphere 859.3
1961 Female, age 42, unknown 249.2
Dorsomedial nucleus
nTPM: 201.4
2041 Female, age 72, unknown 242.8
1989 Male, age 62, unknown 195.4
2017 Female, age 42, unknown 165.8
Lateral hypothalamic area
nTPM: 397.2
2271 Male, age 75, both hemispheres 481.3
2228 Male, age 66, unknown 442.8
1791 Male, age 80, right hemisphere 370.5
2412 Male, age 62, unknown 294.1
Mammillary body
nTPM: 148.7
2413 Male, age 66, unknown 224.6
1923 Female, age 72, unknown 187.3
1948 Female, age 72, unknown 135.5
1834 Female, age 42, unknown 113.5
1945 Male, age 80, right hemisphere 82.6
Paraventricular nucleus
nTPM: 188.1
2700 Male, age 62, unknown 188.1
Preoptic area
nTPM: 195.8
1907 Male, age 80, right hemisphere 260.3
1861 Female, age 42, unknown 166.7
2414 Female, age 72, unknown 160.5
Supraoptic nucleus
nTPM: 186.8
2835 Female, age 72, unknown 284.9
2043 Male, age 62, unknown 141.9
1894 Female, age 72, unknown 133.7
Ventromedial nucleus
nTPM: 259.2
1982 Female, age 72, unknown 272.0
1822 Female, age 42, unknown 246.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 157.2
Samples: 257

Max nTPM: 381.8
Min nTPM: 6.1
Std nTPM: 73.4
Median nTPM: 158.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 381.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 377.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 344.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 342.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 329.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 323.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 307.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 306.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 301.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 294.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 293.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 284.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 281.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 277.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 277.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 276.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 276.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 274.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 270.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 266.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 264.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 263.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 262.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 261.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 257.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 255.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 254.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 253.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 252.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 252.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 248.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 247.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 247.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 244.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 243.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 240.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 236.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 236.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 234.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 232.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 231.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 230.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 229.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 227.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 222.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 222.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 221.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 221.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 217.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 217.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 217.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 215.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 215.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 214.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 212.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 211.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 210.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 208.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 206.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 205.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 204.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 201.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 200.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 200.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 198.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 198.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 197.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 197.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 195.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 194.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 192.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 192.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 191.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 191.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 190.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 189.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 189.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 188.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 188.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 188.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 187.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 187.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 186.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 186.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 185.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 185.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 185.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 183.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 183.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 183.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 182.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 182.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 182.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 182.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 181.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 181.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 179.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 178.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 177.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 177.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 176.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 174.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 174.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 173.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 172.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 172.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 172.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 171.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 171.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 171.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 171.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 171.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 171.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 170.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 167.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 166.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 166.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 165.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 164.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 162.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 162.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 162.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 160.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 160.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 159.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 159.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 159.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 158.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 158.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 157.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 157.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 157.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 156.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 155.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 150.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 149.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 149.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 149.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 148.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 147.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 147.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 146.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 145.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 145.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 144.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 143.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 143.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 140.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 139.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 139.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 138.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 138.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 138.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 138.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 138.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 137.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 137.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 137.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 136.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 134.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 133.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 133.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 131.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 128.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 127.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 127.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 127.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 127.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 126.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 125.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 125.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 125.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 124.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 124.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 124.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 120.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 118.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 118.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 117.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 116.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 116.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 113.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 113.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 113.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 110.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 110.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 108.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 106.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 105.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 104.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 104.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 103.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 103.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 102.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 99.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 97.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 97.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 97.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 93.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 91.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 90.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 88.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 87.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 87.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 86.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 86.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 85.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 85.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 84.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 84.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 83.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 82.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 81.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 81.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 79.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 79.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 77.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 76.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 76.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 75.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 74.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 74.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 67.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 67.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 66.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 65.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 64.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 63.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 63.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 61.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 61.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 60.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 59.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 59.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 58.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 57.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 57.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 56.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 54.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 52.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 45.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 44.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 43.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 42.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 38.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 37.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 37.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 36.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 31.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 29.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 28.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 22.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 19.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 17.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 15.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 6.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 89.4
Samples: 4

Max nTPM: 111.3
Min nTPM: 77.3
Sample A Female 111.3
Sample B Female 77.3
Sample C Male 90.9
Sample D Male 78.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

273.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 273.5
Samples: 4

Max nTPM: 311.1
Min nTPM: 243.9
Sample A Male 311.1
Sample B Male 283.9
Sample C Female 255.0
Sample D Female 243.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.7
71381133 Antisense, RP_050510_03_F10, Mouse strain C57BL/6J (56 days, male) 19.7

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