HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.3 nTPM
HPA Brain:74.6 nTPM
GTEx:6.3 nTPM
FANTOM5:56.7 Scaled Tags Per Million
Pig:36.4 nTPM
Mouse:54.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 74.6
Sample id Sample description nTPM
Hippocampus
nTPM: 49.5
2148 Female, age 91, left hemisphere 67.8
2621 Female, age 67, right hemisphere 57.5
1898 Male, age 80, left hemisphere 49.0
1855 Male, age 76, left hemisphere 47.6
1911 Female, age 85, right hemisphere 43.7
2529 Female, age 94, left hemisphere 31.1
Dentate gyrus
nTPM: 53.9
2531 Female, age 67, both hemispheres 87.7
1927 Female, age 91, both hemispheres 77.7
2246 Female, age 85, both hemispheres 44.2
2010 Male, age 76, both hemispheres 43.1
2528 Male, age 74, both hemispheres 39.6
2530 Female, age 94, left hemisphere 31.3
Entorhinal gyrus
nTPM: 42.7
2613 Female, age 94, left hemisphere 53.5
1938 Female, age 85, left hemisphere 47.4
2764 Male, age 80, right hemisphere 44.5
1787 Male, age 76, left hemisphere 38.6
2686 Male, age 75, right hemisphere 37.5
2117 Female, age 91, right hemisphere 34.5
Hippocampus, CA1
nTPM: 65.4
2749 Male, age 80, left hemisphere 130.1
1873 Female, age 85, both hemispheres 57.6
2045 Male, age 76, both hemispheres 56.7
2527 Male, age 74, both hemispheres 41.6
2082 Female, age 91, right hemisphere 41.2
Hippocampus, CA2
nTPM: 43.8
1963 Male, age 80, left hemisphere 68.0
1892 Male, age 76, both hemispheres 48.7
2113 Female, age 91, right hemisphere 39.5
2437 Female, age 94, left hemisphere 36.9
1940 Female, age 85, left hemisphere 35.5
2249 Male, age 74, both hemispheres 34.5
Hippocampus, CA3
nTPM: 74.6
2137 Male, age 80, left hemisphere 141.4
2620 Female, age 94, left hemisphere 90.7
2861 Female, age 67, both hemispheres 70.0
2436 Male, age 74, both hemispheres 54.8
1867 Male, age 76, both hemispheres 53.0
1891 Female, age 85, both hemispheres 37.5
Parahippocampal cortex
nTPM: 45.3
2245 Female, age 91, both hemispheres 64.2
2693 Female, age 94, both hemispheres 59.3
1933 Female, age 85, both hemispheres 48.1
2250 Female, age 67, right hemisphere 47.6
1990 Female, age 91, right hemisphere 44.1
2018 Male, age 76, both hemispheres 42.6
2532 Female, age 72, left hemisphere 42.1
1850 Male, age 80, both hemispheres 41.8
2622 Female, age 67, right hemisphere 38.7
2692 Male, age 74, both hemispheres 25.1
Perirhinal gyrus
nTPM: 54.1
2521 Female, age 94, right hemisphere 69.8
1847 Female, age 91, left hemisphere 66.9
1794 Male, age 80, right hemisphere 51.1
1841 Female, age 85, right hemisphere 45.4
2848 Male, age 76, right hemisphere 37.4
Subiculum
nTPM: 39.9
1901 Male, age 80, both hemispheres 62.6
1977 Female, age 85, both hemispheres 46.5
2729 Female, age 91, right hemisphere 43.4
2619 Male, age 74, both hemispheres 34.0
2042 Male, age 76, both hemispheres 29.6
2438 Female, age 94, left hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.3
Samples: 255

Max nTPM: 22.6
Min nTPM: 0.2
Std nTPM: 4.8
Median nTPM: 5.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 22.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 20.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 20.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 19.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 18.2
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 17.7
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 17.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 16.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 16.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 16.7
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 16.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 56.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.7
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 35.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.4
Pig sample Sample description nTPM
Subiculum
nTPM: 31.9
Samples: 4

Max nTPM: 46.0
Min nTPM: 23.9
Sample A Female 46.0
Sample B Female 31.6
Sample C Male 26.0
Sample D Male 23.9
Dorsal hippocampus
nTPM: 36.4
Samples: 4

Max nTPM: 43.9
Min nTPM: 25.1
Sample A Female 35.6
Sample B Female 40.9
Sample C Male 25.1
Sample D Male 43.9
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 36.5
Min nTPM: 30.9
Sample A Female 36.5
Sample B Female 30.9
Sample C Male 36.0
Sample D Male 34.2
Ventral hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 33.8
Min nTPM: 26.0
Sample A Female 26.0
Sample B Female 30.5
Sample C Male 28.3
Sample D Male 33.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 54.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.5
Samples: 4

Max nTPM: 59.4
Min nTPM: 39.3
Sample A Male 39.3
Sample B Male 52.9
Sample C Female 54.5
Sample D Female 59.4
Hippocampal formation
nTPM: 54.0
Samples: 4

Max nTPM: 62.7
Min nTPM: 48.3
Sample A Male 51.7
Sample B Male 53.2
Sample C Female 62.7
Sample D Female 48.3

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