A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
7.5
nTPM
Monaco:
33.2
nTPM
Schmiedel:
83.0
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
7.5
HPA sample
nTPM
Classical monocyte nTPM: 3.5
Samples: 6
Max nTPM: 5.4
Min nTPM: 2.6
P10809_1003
3.0
P10809_1020
3.7
P10809_1039
5.4
P10809_1058
3.6
P10809_1080
2.9
P10809_1107
2.6
Intermediate monocyte nTPM: 4.1
Samples: 6
Max nTPM: 5.5
Min nTPM: 2.6
P10809_1004
4.1
P10809_1023
2.6
P10809_1042
5.5
P10809_1061
4.7
P10809_1081
4.2
P10809_1108
3.4
Non-classical monocyte nTPM: 7.5
Samples: 5
Max nTPM: 21.0
Min nTPM: 3.8
P10809_1005
3.8
P10809_1053
3.9
P10809_1072
21.0
P10809_1082
4.6
P10809_1109
4.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
33.2
Monaco sample
nTPM
Classical monocyte nTPM: 25.7
Samples: 4
Max nTPM: 35.0
Min nTPM: 19.3
RHH5313_R3680
21.1
RHH5221_R3593
35.0
RHH5250_R3622
19.3
RHH5279_R3651
27.3
Intermediate monocyte nTPM: 30.3
Samples: 4
Max nTPM: 37.4
Min nTPM: 23.0
RHH5314_R3681
23.0
RHH5222_R3594
37.4
RHH5251_R3623
31.2
RHH5280_R3652
29.7
Non-classical monocyte nTPM: 33.2
Samples: 4
Max nTPM: 45.2
Min nTPM: 24.1
RHH5315_R3682
24.7
RHH5223_R3595
38.7
RHH5252_R3624
45.2
RHH5281_R3653
24.1
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
83.0
Schmiedel sample id
TPM
Classical monocyte TPM: 52.4
Samples: 91
Max TPM: 69.0
Min TPM: 35.2
MONOCYTES_1
69.0
MONOCYTES_2
66.2
MONOCYTES_3
63.9
MONOCYTES_4
63.3
MONOCYTES_5
63.1
MONOCYTES_6
62.7
MONOCYTES_7
62.5
MONOCYTES_8
62.5
MONOCYTES_9
62.4
MONOCYTES_10
62.3
MONOCYTES_11
61.0
MONOCYTES_12
60.7
MONOCYTES_13
60.6
MONOCYTES_14
60.2
MONOCYTES_15
60.2
MONOCYTES_16
59.9
MONOCYTES_17
59.9
MONOCYTES_18
59.4
MONOCYTES_19
59.0
MONOCYTES_20
58.8
MONOCYTES_21
58.5
MONOCYTES_22
58.2
MONOCYTES_23
58.1
MONOCYTES_24
57.9
MONOCYTES_25
57.8
MONOCYTES_26
57.6
MONOCYTES_27
56.6
MONOCYTES_28
56.5
MONOCYTES_29
56.4
MONOCYTES_30
56.3
MONOCYTES_31
56.1
MONOCYTES_32
55.6
MONOCYTES_33
55.5
MONOCYTES_34
55.5
MONOCYTES_35
54.1
MONOCYTES_36
54.0
MONOCYTES_37
53.9
MONOCYTES_38
53.7
MONOCYTES_39
53.5
MONOCYTES_40
53.1
MONOCYTES_41
52.9
MONOCYTES_42
52.3
MONOCYTES_43
52.0
MONOCYTES_44
51.7
MONOCYTES_45
51.6
MONOCYTES_46
51.5
MONOCYTES_47
51.4
MONOCYTES_48
51.1
MONOCYTES_49
50.8
MONOCYTES_50
50.7
MONOCYTES_51
50.4
MONOCYTES_52
50.4
MONOCYTES_53
49.9
MONOCYTES_54
49.9
MONOCYTES_55
49.2
MONOCYTES_56
49.2
MONOCYTES_57
49.0
MONOCYTES_58
49.0
MONOCYTES_59
49.0
MONOCYTES_60
48.9
MONOCYTES_61
48.8
MONOCYTES_62
48.8
MONOCYTES_63
48.6
MONOCYTES_64
48.5
MONOCYTES_65
48.5
MONOCYTES_66
48.0
MONOCYTES_67
47.9
MONOCYTES_68
47.8
MONOCYTES_69
47.8
MONOCYTES_70
47.7
MONOCYTES_71
47.3
MONOCYTES_72
46.9
MONOCYTES_73
46.6
MONOCYTES_74
46.6
MONOCYTES_75
46.4
MONOCYTES_76
46.1
MONOCYTES_77
46.0
MONOCYTES_78
46.0
MONOCYTES_79
45.4
MONOCYTES_80
44.8
MONOCYTES_81
44.3
MONOCYTES_82
44.0
MONOCYTES_83
43.9
MONOCYTES_84
43.8
MONOCYTES_85
43.5
MONOCYTES_86
43.1
MONOCYTES_87
42.8
MONOCYTES_88
42.5
MONOCYTES_89
38.2
MONOCYTES_90
37.4
MONOCYTES_91
35.2
Show allShow less
Non-classical monocyte TPM: 83.0
Samples: 90
Max TPM: 124.2
Min TPM: 58.4
M2_1
124.2
M2_2
122.6
M2_3
114.8
M2_4
113.0
M2_5
112.9
M2_6
111.0
M2_7
109.4
M2_8
109.2
M2_9
103.5
M2_10
100.5
M2_11
99.2
M2_12
98.0
M2_13
96.3
M2_14
95.9
M2_15
94.7
M2_16
93.9
M2_17
93.8
M2_18
93.3
M2_19
92.8
M2_20
92.6
M2_21
91.0
M2_22
90.5
M2_23
90.1
M2_24
89.6
M2_25
89.4
M2_26
88.9
M2_27
88.6
M2_28
87.8
M2_29
87.5
M2_30
87.2
M2_31
85.7
M2_32
85.5
M2_33
85.3
M2_34
84.8
M2_35
84.7
M2_36
84.6
M2_37
83.7
M2_38
83.1
M2_39
82.7
M2_40
81.8
M2_41
81.7
M2_42
80.9
M2_43
80.6
M2_44
80.5
M2_45
80.2
M2_46
80.1
M2_47
79.6
M2_48
79.0
M2_49
78.6
M2_50
78.4
M2_51
77.6
M2_52
77.3
M2_53
77.2
M2_54
77.0
M2_55
77.0
M2_56
76.7
M2_57
76.5
M2_58
76.2
M2_59
75.8
M2_60
75.8
M2_61
75.0
M2_62
74.9
M2_63
74.9
M2_64
74.4
M2_65
74.1
M2_66
73.7
M2_67
73.4
M2_68
72.4
M2_69
72.4
M2_70
72.2
M2_71
72.2
M2_72
72.1
M2_73
71.9
M2_74
71.4
M2_75
71.3
M2_76
71.1
M2_77
70.7
M2_78
69.5
M2_79
69.1
M2_80
68.6
M2_81
68.3
M2_82
67.3
M2_83
66.6
M2_84
66.2
M2_85
66.1
M2_86
65.8
M2_87
65.6
M2_88
65.4
M2_89
62.7
M2_90
58.4
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
