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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:33.4 nTPM
Monaco:25.4 nTPM
Schmiedel:27.7 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

33.4
HPA sample nTPM
NK-cell
nTPM: 33.4
Samples: 6

Max nTPM: 54.4
Min nTPM: 8.7
P10809_1013 20.8
P10809_1033 54.4
P10809_1052 33.9
P10809_1071 8.7
P10809_1093 50.6
P10809_1103 32.0

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

25.4
Monaco sample nTPM
NK-cell
nTPM: 25.4
Samples: 4

Max nTPM: 33.1
Min nTPM: 13.0
RHH5316_R3683 33.1
RHH5224_R3596 31.1
RHH5253_R3625 13.0
RHH5282_R3654 24.4

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

27.7
Schmiedel sample id TPM
NK-cell
TPM: 27.7
Samples: 90

Max TPM: 51.9
Min TPM: 7.1
NK_1 51.9
NK_2 49.5
NK_3 47.6
NK_4 46.7
NK_5 45.6
NK_6 45.3
NK_7 42.8
NK_8 42.2
NK_9 41.9
NK_10 41.9
NK_11 41.0
NK_12 40.0
NK_13 39.7
NK_14 39.3
NK_15 39.0
NK_16 38.8
NK_17 38.0
NK_18 37.5
NK_19 37.4
NK_20 37.4
NK_21 36.8
NK_22 36.7
NK_23 35.9
NK_24 35.9
NK_25 35.6
NK_26 35.4
NK_27 34.9
NK_28 34.7
NK_29 33.8
NK_30 33.5
NK_31 33.5
NK_32 33.1
NK_33 32.8
NK_34 32.4
NK_35 31.9
NK_36 30.9
NK_37 30.0
NK_38 30.0
NK_39 29.7
NK_40 29.6
NK_41 28.9
NK_42 28.9
NK_43 28.6
NK_44 28.2
NK_45 27.1
NK_46 26.8
NK_47 26.4
NK_48 26.2
NK_49 25.9
NK_50 25.7
NK_51 25.2
NK_52 25.0
NK_53 24.9
NK_54 24.4
NK_55 24.3
NK_56 24.1
NK_57 24.0
NK_58 23.7
NK_59 23.6
NK_60 22.6
NK_61 22.5
NK_62 22.0
NK_63 21.3
NK_64 21.1
NK_65 21.0
NK_66 20.9
NK_67 20.2
NK_68 20.1
NK_69 19.4
NK_70 18.2
NK_71 18.2
NK_72 18.0
NK_73 18.0
NK_74 17.7
NK_75 16.9
NK_76 16.0
NK_77 14.9
NK_78 14.8
NK_79 14.3
NK_80 13.7
NK_81 13.3
NK_82 12.3
NK_83 11.7
NK_84 11.1
NK_85 10.8
NK_86 9.9
NK_87 8.6
NK_88 8.5
NK_89 7.9
NK_90 7.1
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