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  • TISSUE

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  • NDUFB4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:166.1 nTPM
HPA Brain:112.3 nTPM
GTEx:166.1 nTPM
Pig:122.9 nTPM
Mouse:33.8 nTPM
Allen mouse:1.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 89.3
2226 Male, age 75, left hemisphere 114.6
1961 Female, age 42, unknown 64.1
Dorsomedial nucleus
nTPM: 68.3
2041 Female, age 72, unknown 78.3
1989 Male, age 62, unknown 70.4
2017 Female, age 42, unknown 56.1
Lateral hypothalamic area
nTPM: 86.7
1791 Male, age 80, right hemisphere 100.7
2228 Male, age 66, unknown 96.3
2271 Male, age 75, both hemispheres 90.6
2412 Male, age 62, unknown 58.9
Mammillary body
nTPM: 112.3
1923 Female, age 72, unknown 177.3
1948 Female, age 72, unknown 100.9
2413 Male, age 66, unknown 97.7
1834 Female, age 42, unknown 95.1
1945 Male, age 80, right hemisphere 90.7
Paraventricular nucleus
nTPM: 75.3
2700 Male, age 62, unknown 75.3
Preoptic area
nTPM: 70.7
1907 Male, age 80, right hemisphere 80.4
1861 Female, age 42, unknown 68.6
2414 Female, age 72, unknown 63.1
Supraoptic nucleus
nTPM: 104.0
1894 Female, age 72, unknown 133.2
2043 Male, age 62, unknown 94.2
2835 Female, age 72, unknown 84.5
Ventromedial nucleus
nTPM: 61.4
1982 Female, age 72, unknown 68.3
1822 Female, age 42, unknown 54.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 166.1
Samples: 257

Max nTPM: 345.2
Min nTPM: 103.5
Std nTPM: 36.3
Median nTPM: 161.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 345.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 313.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 296.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 292.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 285.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 279.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 257.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 257.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 254.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 249.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 246.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 234.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 234.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 232.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 226.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 220.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 220.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 219.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 215.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 214.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 214.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 213.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 212.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 212.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 211.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 208.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 206.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 203.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 202.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 201.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 201.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 200.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 200.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 200.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 199.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 198.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 196.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 196.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 195.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 193.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 193.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 193.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 192.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 192.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 191.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 191.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 190.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 190.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 189.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 189.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 189.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 188.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 188.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 187.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 186.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 186.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 184.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 184.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 184.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 184.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 183.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 183.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 182.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 182.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 182.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 182.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 181.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 181.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 181.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 180.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 180.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 180.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 180.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 179.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 178.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 177.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 177.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 177.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 177.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 177.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 176.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 176.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 176.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 175.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 175.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 175.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 175.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 175.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 174.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 173.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 173.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 173.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 172.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 172.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 171.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 170.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 170.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 170.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 169.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 169.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 168.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 168.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 168.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 167.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 167.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 166.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 166.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 166.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 166.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 166.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 165.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 165.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 165.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 165.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 165.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 164.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 164.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 164.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 164.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 163.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 162.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 162.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 162.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 162.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 162.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 161.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 161.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 161.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 161.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 161.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 160.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 160.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 160.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 160.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 159.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 159.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 159.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 159.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 158.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 157.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 157.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 156.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 156.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 155.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 155.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 155.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 155.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 154.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 154.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 154.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 154.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 153.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 152.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 152.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 152.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 151.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 151.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 151.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 150.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 149.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 149.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 149.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 149.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 149.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 149.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 148.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 148.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 148.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 148.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 147.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 147.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 147.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 146.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 146.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 146.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 146.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 145.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 145.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 145.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 145.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 145.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 144.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 144.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 144.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 144.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 144.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 144.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 143.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 143.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 142.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 142.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 142.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 142.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 142.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 142.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 142.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 141.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 141.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 141.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 141.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 140.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 140.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 138.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 138.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 138.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 138.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 137.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 135.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 135.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 134.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 134.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 133.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 133.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 133.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 132.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 132.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 132.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 132.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 132.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 132.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 131.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 131.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 131.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 130.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 130.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 130.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 129.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 129.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 128.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 128.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 127.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 127.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 126.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 126.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 125.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 125.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 124.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 124.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 122.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 122.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 122.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 122.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 120.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 120.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 119.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 119.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 118.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 118.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 116.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 116.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 116.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 114.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 113.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 113.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 113.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 103.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 103.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 122.9
Samples: 4

Max nTPM: 138.4
Min nTPM: 113.0
Sample A Female 138.4
Sample B Female 127.1
Sample C Male 113.0
Sample D Male 113.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 33.8
Samples: 4

Max nTPM: 37.4
Min nTPM: 31.4
Sample A Male 32.5
Sample B Male 37.4
Sample C Female 34.0
Sample D Female 31.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.9
68745006 Antisense, RP_050210_01_A12, Mouse strain C57BL/6J (56 days, male) 1.9

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