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BETA
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  • PPP2R5A
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:3.4 nTPM
Monaco:47.2 nTPM
Schmiedel:204.1 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

3.4
HPA sample nTPM
Classical monocyte
nTPM: 2.0
Samples: 6

Max nTPM: 2.8
Min nTPM: 1.3
P10809_1003 1.3
P10809_1020 2.0
P10809_1039 1.9
P10809_1058 2.8
P10809_1080 1.8
P10809_1107 2.2
Intermediate monocyte
nTPM: 2.3
Samples: 6

Max nTPM: 4.4
Min nTPM: 0.4
P10809_1004 4.4
P10809_1023 2.5
P10809_1042 1.2
P10809_1061 0.4
P10809_1081 2.2
P10809_1108 3.2
Non-classical monocyte
nTPM: 3.4
Samples: 5

Max nTPM: 6.4
Min nTPM: 1.9
P10809_1005 1.9
P10809_1053 2.3
P10809_1072 6.4
P10809_1082 3.4
P10809_1109 2.8

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

47.2
Monaco sample nTPM
Classical monocyte
nTPM: 32.4
Samples: 4

Max nTPM: 35.6
Min nTPM: 29.9
RHH5313_R3680 35.6
RHH5221_R3593 33.7
RHH5250_R3622 30.5
RHH5279_R3651 29.9
Intermediate monocyte
nTPM: 47.2
Samples: 4

Max nTPM: 62.4
Min nTPM: 36.6
RHH5314_R3681 36.6
RHH5222_R3594 48.9
RHH5251_R3623 62.4
RHH5280_R3652 40.9
Non-classical monocyte
nTPM: 33.3
Samples: 4

Max nTPM: 47.1
Min nTPM: 21.0
RHH5315_R3682 41.1
RHH5223_R3595 21.0
RHH5252_R3624 47.1
RHH5281_R3653 23.8

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

204.1
Schmiedel sample id TPM
Classical monocyte
TPM: 110.6
Samples: 91

Max TPM: 160.9
Min TPM: 76.2
MONOCYTES_1 160.9
MONOCYTES_2 154.4
MONOCYTES_3 149.1
MONOCYTES_4 145.9
MONOCYTES_5 142.4
MONOCYTES_6 142.0
MONOCYTES_7 140.6
MONOCYTES_8 140.1
MONOCYTES_9 138.8
MONOCYTES_10 138.4
MONOCYTES_11 138.2
MONOCYTES_12 137.1
MONOCYTES_13 134.6
MONOCYTES_14 134.3
MONOCYTES_15 131.2
MONOCYTES_16 130.6
MONOCYTES_17 128.9
MONOCYTES_18 128.9
MONOCYTES_19 127.5
MONOCYTES_20 126.3
MONOCYTES_21 125.9
MONOCYTES_22 124.9
MONOCYTES_23 123.7
MONOCYTES_24 123.0
MONOCYTES_25 122.0
MONOCYTES_26 120.9
MONOCYTES_27 120.5
MONOCYTES_28 120.2
MONOCYTES_29 120.2
MONOCYTES_30 119.5
MONOCYTES_31 118.2
MONOCYTES_32 116.2
MONOCYTES_33 116.0
MONOCYTES_34 115.2
MONOCYTES_35 114.7
MONOCYTES_36 114.2
MONOCYTES_37 112.6
MONOCYTES_38 110.8
MONOCYTES_39 109.5
MONOCYTES_40 109.5
MONOCYTES_41 108.1
MONOCYTES_42 108.1
MONOCYTES_43 108.0
MONOCYTES_44 107.1
MONOCYTES_45 106.8
MONOCYTES_46 106.7
MONOCYTES_47 106.5
MONOCYTES_48 106.4
MONOCYTES_49 106.4
MONOCYTES_50 106.3
MONOCYTES_51 104.8
MONOCYTES_52 104.4
MONOCYTES_53 104.4
MONOCYTES_54 104.2
MONOCYTES_55 104.0
MONOCYTES_56 102.9
MONOCYTES_57 102.1
MONOCYTES_58 101.9
MONOCYTES_59 101.3
MONOCYTES_60 101.0
MONOCYTES_61 100.8
MONOCYTES_62 100.2
MONOCYTES_63 99.8
MONOCYTES_64 99.8
MONOCYTES_65 99.6
MONOCYTES_66 99.5
MONOCYTES_67 98.7
MONOCYTES_68 98.2
MONOCYTES_69 96.5
MONOCYTES_70 95.8
MONOCYTES_71 95.7
MONOCYTES_72 94.9
MONOCYTES_73 94.8
MONOCYTES_74 93.7
MONOCYTES_75 93.2
MONOCYTES_76 92.5
MONOCYTES_77 92.0
MONOCYTES_78 91.2
MONOCYTES_79 91.1
MONOCYTES_80 89.4
MONOCYTES_81 88.5
MONOCYTES_82 87.9
MONOCYTES_83 86.6
MONOCYTES_84 86.1
MONOCYTES_85 85.8
MONOCYTES_86 85.2
MONOCYTES_87 84.7
MONOCYTES_88 83.3
MONOCYTES_89 78.6
MONOCYTES_90 78.1
MONOCYTES_91 76.2
Show allShow less
Non-classical monocyte
TPM: 204.1
Samples: 90

Max TPM: 308.6
Min TPM: 116.3
M2_1 308.6
M2_2 302.6
M2_3 297.9
M2_4 282.8
M2_5 276.4
M2_6 267.5
M2_7 263.1
M2_8 260.8
M2_9 259.5
M2_10 254.0
M2_11 250.8
M2_12 242.8
M2_13 240.1
M2_14 237.0
M2_15 235.2
M2_16 230.5
M2_17 227.5
M2_18 227.4
M2_19 221.2
M2_20 220.5
M2_21 218.5
M2_22 218.3
M2_23 216.1
M2_24 215.6
M2_25 214.5
M2_26 213.6
M2_27 213.3
M2_28 212.9
M2_29 212.7
M2_30 212.4
M2_31 211.1
M2_32 210.5
M2_33 209.4
M2_34 208.4
M2_35 207.4
M2_36 207.0
M2_37 206.7
M2_38 205.4
M2_39 203.7
M2_40 202.7
M2_41 201.8
M2_42 201.7
M2_43 201.0
M2_44 200.8
M2_45 200.7
M2_46 200.6
M2_47 199.5
M2_48 199.3
M2_49 198.8
M2_50 198.6
M2_51 198.6
M2_52 197.5
M2_53 197.0
M2_54 196.4
M2_55 196.1
M2_56 195.9
M2_57 195.3
M2_58 194.9
M2_59 193.7
M2_60 193.3
M2_61 188.5
M2_62 186.2
M2_63 184.3
M2_64 184.1
M2_65 182.0
M2_66 181.6
M2_67 181.1
M2_68 180.8
M2_69 179.9
M2_70 179.5
M2_71 178.8
M2_72 178.7
M2_73 178.0
M2_74 175.1
M2_75 174.8
M2_76 174.0
M2_77 173.6
M2_78 171.4
M2_79 167.8
M2_80 166.8
M2_81 166.4
M2_82 165.3
M2_83 163.5
M2_84 162.6
M2_85 157.5
M2_86 154.2
M2_87 148.0
M2_88 146.3
M2_89 135.4
M2_90 116.3
Show allShow less

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