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  • CTNNA2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:37.4 nTPM
HPA Brain:86.2 nTPM
GTEx:37.4 nTPM
Pig:69.7 nTPM
Mouse:66.8 nTPM
Allen mouse:0.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 73.7
1961 Female, age 42, unknown 81.1
2226 Male, age 75, left hemisphere 66.3
Dorsomedial nucleus
nTPM: 86.2
1989 Male, age 62, unknown 133.8
2041 Female, age 72, unknown 66.7
2017 Female, age 42, unknown 58.0
Lateral hypothalamic area
nTPM: 74.3
1791 Male, age 80, right hemisphere 93.2
2271 Male, age 75, both hemispheres 87.2
2412 Male, age 62, unknown 70.9
2228 Male, age 66, unknown 45.9
Mammillary body
nTPM: 59.3
2413 Male, age 66, unknown 74.1
1923 Female, age 72, unknown 66.0
1945 Male, age 80, right hemisphere 58.6
1834 Female, age 42, unknown 53.3
1948 Female, age 72, unknown 44.4
Paraventricular nucleus
nTPM: 44.3
2700 Male, age 62, unknown 44.3
Preoptic area
nTPM: 70.2
1907 Male, age 80, right hemisphere 79.3
1861 Female, age 42, unknown 70.2
2414 Female, age 72, unknown 61.0
Supraoptic nucleus
nTPM: 66.8
1894 Female, age 72, unknown 86.7
2835 Female, age 72, unknown 57.5
2043 Male, age 62, unknown 56.4
Ventromedial nucleus
nTPM: 83.2
1822 Female, age 42, unknown 90.4
1982 Female, age 72, unknown 75.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 37.4
Samples: 257

Max nTPM: 120.7
Min nTPM: 10.4
Std nTPM: 13.6
Median nTPM: 35.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 120.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 96.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 93.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 91.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 83.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 83.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 74.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 68.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 66.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 66.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 65.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 64.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 61.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 60.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 59.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 58.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 57.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 57.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 56.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 54.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 53.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 53.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 53.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 52.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 52.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 51.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 51.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 48.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 48.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 47.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 47.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 47.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 47.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 47.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 47.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 46.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 46.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 46.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 46.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 46.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 46.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 45.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 45.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 45.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 45.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 45.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 45.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 45.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 44.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 44.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 44.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 43.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 43.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 43.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 43.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 43.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 43.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 43.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 43.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 43.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 42.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 42.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 42.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 42.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 42.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 42.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 41.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 41.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 41.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 41.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 41.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 41.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 41.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 41.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 41.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 41.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 41.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 40.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 40.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 40.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 40.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 40.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 39.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 39.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 39.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 39.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 39.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 39.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 39.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 38.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 38.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 38.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 38.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 38.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 37.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 37.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 37.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 37.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 37.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 37.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 37.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 37.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 37.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 37.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 37.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 37.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 37.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 36.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 36.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 36.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 36.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 36.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 36.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 36.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 36.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 36.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 36.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 36.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 36.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 35.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 35.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 35.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 35.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 35.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 35.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 35.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 35.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 35.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 35.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 35.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 35.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 35.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 35.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 34.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 34.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 34.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 34.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 34.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 34.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 34.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 34.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 34.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 34.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 34.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 33.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 33.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 33.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 33.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 33.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 33.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 33.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 33.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 33.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 33.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 33.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 33.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 33.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 32.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 32.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 32.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 32.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 32.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 32.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 32.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 32.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 32.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 32.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 32.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 32.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 32.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 32.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 32.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 31.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 31.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 31.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 31.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 31.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 31.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 31.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 30.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 30.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 30.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 30.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 30.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 30.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 30.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 30.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 29.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 29.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 29.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 29.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 29.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 29.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 29.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 29.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 29.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 28.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 28.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 28.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 28.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 28.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 28.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 28.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 27.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 27.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 27.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 27.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 27.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 27.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 27.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 27.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 27.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 27.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 26.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 26.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 26.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 26.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 26.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 26.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 26.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 26.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 26.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 26.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 25.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 25.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 25.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 24.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 24.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 24.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 24.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 24.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 23.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 23.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 23.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 23.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 23.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 23.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 22.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 22.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 21.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 21.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 21.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 21.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 20.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 19.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 19.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 18.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 18.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 18.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 18.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 17.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 13.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 13.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 12.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 10.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 69.7
Samples: 4

Max nTPM: 89.4
Min nTPM: 55.2
Sample A Female 89.4
Sample B Female 69.2
Sample C Male 65.1
Sample D Male 55.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 66.8
Samples: 4

Max nTPM: 69.6
Min nTPM: 60.9
Sample A Male 60.9
Sample B Male 68.7
Sample C Female 69.6
Sample D Female 67.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.8
74363355 Antisense, RP_051121_02_E02, Mouse strain C57BL/6J (56 days, male) 0.8
73513660 Antisense, RP_051121_02_E02, Mouse strain C57BL/6J (56 days, male) 0.6

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