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BETA
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  • LRRC40
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:6.0 nTPM
Monaco:29.7 nTPM
Schmiedel:29.8 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

6.0
HPA sample nTPM
Classical monocyte
nTPM: 4.5
Samples: 6

Max nTPM: 6.2
Min nTPM: 3.2
P10809_1003 3.2
P10809_1020 6.2
P10809_1039 4.8
P10809_1058 4.1
P10809_1080 5.2
P10809_1107 3.7
Intermediate monocyte
nTPM: 5.9
Samples: 6

Max nTPM: 8.3
Min nTPM: 4.0
P10809_1004 6.1
P10809_1023 8.3
P10809_1042 5.4
P10809_1061 4.0
P10809_1081 7.1
P10809_1108 4.8
Non-classical monocyte
nTPM: 5.8
Samples: 5

Max nTPM: 6.3
Min nTPM: 5.5
P10809_1005 5.5
P10809_1053 6.0
P10809_1072 5.6
P10809_1082 5.8
P10809_1109 6.3

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

29.7
Monaco sample nTPM
Classical monocyte
nTPM: 25.2
Samples: 4

Max nTPM: 31.1
Min nTPM: 19.3
RHH5313_R3680 19.3
RHH5221_R3593 22.1
RHH5250_R3622 28.3
RHH5279_R3651 31.1
Intermediate monocyte
nTPM: 29.0
Samples: 4

Max nTPM: 36.3
Min nTPM: 22.8
RHH5314_R3681 22.8
RHH5222_R3594 36.3
RHH5251_R3623 29.2
RHH5280_R3652 27.7
Non-classical monocyte
nTPM: 29.7
Samples: 4

Max nTPM: 38.5
Min nTPM: 23.2
RHH5315_R3682 24.3
RHH5223_R3595 38.5
RHH5252_R3624 23.2
RHH5281_R3653 32.9

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

29.8
Schmiedel sample id TPM
Classical monocyte
TPM: 22.2
Samples: 91

Max TPM: 27.5
Min TPM: 15.4
MONOCYTES_1 27.5
MONOCYTES_2 27.4
MONOCYTES_3 27.4
MONOCYTES_4 27.3
MONOCYTES_5 27.1
MONOCYTES_6 26.8
MONOCYTES_7 26.5
MONOCYTES_8 26.4
MONOCYTES_9 25.6
MONOCYTES_10 25.5
MONOCYTES_11 25.2
MONOCYTES_12 25.0
MONOCYTES_13 24.9
MONOCYTES_14 24.8
MONOCYTES_15 24.6
MONOCYTES_16 24.3
MONOCYTES_17 24.3
MONOCYTES_18 24.3
MONOCYTES_19 24.1
MONOCYTES_20 24.1
MONOCYTES_21 24.0
MONOCYTES_22 24.0
MONOCYTES_23 24.0
MONOCYTES_24 24.0
MONOCYTES_25 24.0
MONOCYTES_26 23.9
MONOCYTES_27 23.8
MONOCYTES_28 23.8
MONOCYTES_29 23.4
MONOCYTES_30 23.3
MONOCYTES_31 23.1
MONOCYTES_32 23.0
MONOCYTES_33 23.0
MONOCYTES_34 23.0
MONOCYTES_35 22.9
MONOCYTES_36 22.9
MONOCYTES_37 22.9
MONOCYTES_38 22.7
MONOCYTES_39 22.7
MONOCYTES_40 22.6
MONOCYTES_41 22.6
MONOCYTES_42 22.5
MONOCYTES_43 22.5
MONOCYTES_44 22.4
MONOCYTES_45 22.4
MONOCYTES_46 22.3
MONOCYTES_47 22.3
MONOCYTES_48 22.3
MONOCYTES_49 22.2
MONOCYTES_50 22.2
MONOCYTES_51 22.0
MONOCYTES_52 22.0
MONOCYTES_53 22.0
MONOCYTES_54 22.0
MONOCYTES_55 21.8
MONOCYTES_56 21.7
MONOCYTES_57 21.7
MONOCYTES_58 21.6
MONOCYTES_59 21.3
MONOCYTES_60 21.2
MONOCYTES_61 21.2
MONOCYTES_62 21.2
MONOCYTES_63 21.0
MONOCYTES_64 20.9
MONOCYTES_65 20.9
MONOCYTES_66 20.6
MONOCYTES_67 20.5
MONOCYTES_68 20.3
MONOCYTES_69 20.3
MONOCYTES_70 20.0
MONOCYTES_71 19.9
MONOCYTES_72 19.9
MONOCYTES_73 19.8
MONOCYTES_74 19.7
MONOCYTES_75 19.6
MONOCYTES_76 19.5
MONOCYTES_77 19.5
MONOCYTES_78 19.1
MONOCYTES_79 19.1
MONOCYTES_80 19.1
MONOCYTES_81 19.0
MONOCYTES_82 19.0
MONOCYTES_83 18.9
MONOCYTES_84 18.0
MONOCYTES_85 18.0
MONOCYTES_86 17.7
MONOCYTES_87 17.3
MONOCYTES_88 16.9
MONOCYTES_89 16.8
MONOCYTES_90 15.8
MONOCYTES_91 15.4
Show allShow less
Non-classical monocyte
TPM: 29.8
Samples: 90

Max TPM: 45.9
Min TPM: 12.3
M2_1 45.9
M2_2 45.5
M2_3 44.8
M2_4 42.5
M2_5 42.4
M2_6 40.7
M2_7 40.4
M2_8 40.0
M2_9 39.9
M2_10 39.2
M2_11 38.7
M2_12 35.9
M2_13 35.6
M2_14 35.1
M2_15 34.3
M2_16 34.2
M2_17 34.0
M2_18 33.8
M2_19 33.8
M2_20 33.5
M2_21 33.1
M2_22 32.7
M2_23 32.6
M2_24 32.5
M2_25 32.0
M2_26 31.2
M2_27 30.9
M2_28 30.9
M2_29 30.8
M2_30 30.7
M2_31 30.5
M2_32 30.5
M2_33 30.4
M2_34 30.3
M2_35 30.2
M2_36 30.2
M2_37 30.1
M2_38 29.9
M2_39 29.9
M2_40 29.8
M2_41 29.7
M2_42 29.6
M2_43 29.5
M2_44 29.3
M2_45 29.1
M2_46 29.1
M2_47 28.9
M2_48 28.9
M2_49 28.8
M2_50 28.5
M2_51 28.3
M2_52 28.1
M2_53 28.0
M2_54 27.9
M2_55 27.4
M2_56 27.3
M2_57 27.0
M2_58 26.9
M2_59 26.9
M2_60 26.7
M2_61 26.6
M2_62 26.6
M2_63 26.5
M2_64 26.4
M2_65 26.3
M2_66 26.1
M2_67 26.0
M2_68 25.9
M2_69 25.9
M2_70 25.8
M2_71 25.5
M2_72 25.4
M2_73 25.3
M2_74 25.2
M2_75 25.0
M2_76 24.9
M2_77 24.6
M2_78 24.6
M2_79 24.1
M2_80 23.9
M2_81 23.3
M2_82 23.2
M2_83 22.9
M2_84 22.7
M2_85 22.5
M2_86 22.3
M2_87 22.1
M2_88 21.7
M2_89 20.9
M2_90 12.3
Show allShow less

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