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  • TISSUE

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  • IDI1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:53.1 nTPM
HPA Brain:60.3 nTPM
GTEx:53.1 nTPM
Pig:61.6 nTPM
Mouse:71.0 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 56.5
2226 Male, age 75, left hemisphere 81.1
1961 Female, age 42, unknown 31.8
Dorsomedial nucleus
nTPM: 46.6
2041 Female, age 72, unknown 59.7
1989 Male, age 62, unknown 46.1
2017 Female, age 42, unknown 34.0
Lateral hypothalamic area
nTPM: 59.2
2271 Male, age 75, both hemispheres 66.2
1791 Male, age 80, right hemisphere 62.9
2228 Male, age 66, unknown 59.0
2412 Male, age 62, unknown 48.8
Mammillary body
nTPM: 43.4
1923 Female, age 72, unknown 54.0
2413 Male, age 66, unknown 49.4
1945 Male, age 80, right hemisphere 40.4
1948 Female, age 72, unknown 40.0
1834 Female, age 42, unknown 33.3
Paraventricular nucleus
nTPM: 39.5
2700 Male, age 62, unknown 39.5
Preoptic area
nTPM: 44.7
1907 Male, age 80, right hemisphere 54.8
2414 Female, age 72, unknown 42.2
1861 Female, age 42, unknown 37.0
Supraoptic nucleus
nTPM: 60.3
1894 Female, age 72, unknown 72.7
2043 Male, age 62, unknown 56.3
2835 Female, age 72, unknown 51.9
Ventromedial nucleus
nTPM: 52.1
1982 Female, age 72, unknown 65.8
1822 Female, age 42, unknown 38.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 53.1
Samples: 257

Max nTPM: 184.2
Min nTPM: 20.7
Std nTPM: 19.1
Median nTPM: 49.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 184.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 138.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 119.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 115.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 108.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 96.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 96.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 96.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 96.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 95.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 87.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 85.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 82.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 81.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 80.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 79.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 79.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 78.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 78.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 78.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 77.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 77.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 77.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 76.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 76.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 73.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 73.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 73.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 73.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 73.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 72.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 72.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 71.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 71.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 70.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 69.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 69.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 69.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 69.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 68.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 68.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 68.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 68.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 67.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 67.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 67.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 67.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 67.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 66.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 65.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 65.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 65.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 64.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 64.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 63.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 63.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 63.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 62.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 62.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 62.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 62.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 62.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 62.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 62.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 61.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 61.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 61.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 60.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 60.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 60.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 60.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 60.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 60.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 59.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 59.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 59.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 59.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 58.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 58.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 58.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 58.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 58.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 58.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 57.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 57.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 57.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 57.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 57.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 57.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 56.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 55.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 55.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 54.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 54.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 54.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 53.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 53.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 53.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 53.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 52.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 52.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 52.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 52.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 52.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 52.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 52.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 52.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 52.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 52.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 51.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 51.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 51.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 51.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 51.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 51.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 51.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 51.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 51.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 50.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 50.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 50.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 50.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 50.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 49.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 49.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 49.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 49.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 49.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 49.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 49.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 49.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 49.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 48.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 48.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 48.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 48.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 48.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 47.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 47.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 47.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 47.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 47.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 47.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 47.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 47.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 47.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 47.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 47.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 47.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 47.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 46.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 46.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 46.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 46.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 46.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 46.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 46.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 46.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 46.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 45.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 45.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 45.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 45.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 45.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 44.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 44.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 44.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 44.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 44.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 43.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 43.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 43.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 43.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 43.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 43.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 42.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 42.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 42.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 42.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 42.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 42.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 42.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 42.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 42.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 41.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 41.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 41.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 41.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 41.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 40.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 40.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 40.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 40.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 40.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 39.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 39.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 39.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 39.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 39.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 39.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 39.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 39.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 38.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 38.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 38.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 38.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 38.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 38.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 38.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 38.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 37.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 37.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 37.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 37.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 36.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 36.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 36.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 36.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 36.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 36.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 36.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 36.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 36.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 36.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 36.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 36.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 35.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 35.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 35.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 35.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 35.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 35.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 34.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 34.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 34.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 33.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 33.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 32.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 32.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 32.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 32.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 31.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 31.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 31.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 30.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 30.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 28.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 28.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 28.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 27.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 27.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 25.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 24.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 21.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 20.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 20.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 61.6
Samples: 4

Max nTPM: 80.7
Min nTPM: 48.0
Sample A Female 80.7
Sample B Female 65.6
Sample C Male 48.0
Sample D Male 52.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 71.0
Samples: 4

Max nTPM: 74.9
Min nTPM: 68.7
Sample A Male 69.4
Sample B Male 74.9
Sample C Female 71.0
Sample D Female 68.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
413789 Antisense, RP_040809_01_D10, Mouse strain C57BL/6J (56 days, male) 0.1

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