We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
116.6
nTPM
Monaco:
489.5
nTPM
Schmiedel:
122.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.6
HPA sample
nTPM
gdT-cell nTPM: 116.6
Samples: 6
Max nTPM: 144.5
Min nTPM: 97.2
P10809_1007
97.8
P10809_1022
129.7
P10809_1041
116.1
P10809_1060
144.5
P10809_1077
114.1
P10809_1098
97.2
MAIT T-cell nTPM: 94.1
Samples: 6
Max nTPM: 127.8
Min nTPM: 61.5
P10809_1006
79.6
P10809_1024
108.2
P10809_1043
92.5
P10809_1062
127.8
P10809_1083
95.1
P10809_1097
61.5
Memory CD4 T-cell nTPM: 113.3
Samples: 6
Max nTPM: 138.9
Min nTPM: 86.0
P10809_1014
86.0
P10809_1026
115.9
P10809_1045
108.1
P10809_1064
112.7
P10809_1086
138.9
P10809_1113
118.3
Memory CD8 T-cell nTPM: 102.3
Samples: 5
Max nTPM: 116.8
Min nTPM: 80.7
P10809_1012
80.7
P10809_1027
109.9
P10809_1046
96.8
P10809_1065
116.8
P10809_1111
107.5
Naive CD4 T-cell nTPM: 107.8
Samples: 6
Max nTPM: 120.8
Min nTPM: 86.6
P10809_1015
86.6
P10809_1030
105.5
P10809_1049
111.9
P10809_1068
114.8
P10809_1085
120.8
P10809_1112
107.3
Naive CD8 T-cell nTPM: 95.6
Samples: 6
Max nTPM: 114.7
Min nTPM: 75.5
P10809_1016
75.5
P10809_1031
114.7
P10809_1050
88.3
P10809_1069
97.1
P10809_1087
106.3
P10809_1110
91.9
T-reg nTPM: 116.3
Samples: 6
Max nTPM: 142.8
Min nTPM: 76.1
P10809_1018
76.1
P10809_1037
110.7
P10809_1056
119.8
P10809_1075
142.8
P10809_1094
125.1
P10809_1106
123.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
489.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 448.1
Samples: 4
Max nTPM: 612.4
Min nTPM: 351.7
RHH5202_R3573
612.4
RHH5230_R3602
425.9
RHH5259_R3631
351.7
RHH5288_R3660
402.3
Effector memory CD8 T-cell nTPM: 459.2
Samples: 4
Max nTPM: 603.1
Min nTPM: 318.1
RHH5203_R3574
603.1
RHH5231_R3603
343.9
RHH5260_R3632
318.1
RHH5289_R3661
571.7
MAIT T-cell nTPM: 426.6
Samples: 4
Max nTPM: 532.7
Min nTPM: 363.6
RHH5233_R3605
436.4
RHH5205_R3576
532.7
RHH5262_R3634
363.6
RHH5297_R3663
373.5
Memory CD4 T-cell TFH nTPM: 489.6
Samples: 4
Max nTPM: 671.0
Min nTPM: 379.3
RHH5300_R3666
379.3
RHH5236_R3608
468.6
RHH5265_R3637
439.3
RHH5208_R3579
671.0
Memory CD4 T-cell Th1 nTPM: 433.0
Samples: 4
Max nTPM: 517.6
Min nTPM: 369.8
RHH5210_R3581
517.6
RHH5302_R3668
418.0
RHH5238_R3610
426.4
RHH5267_R3639
369.8
Memory CD4 T-cell Th1/Th17 nTPM: 447.3
Samples: 4
Max nTPM: 488.9
Min nTPM: 380.6
RHH5303_R3669
486.8
RHH5211_R3582
488.9
RHH5239_R3611
380.6
RHH5268_R3640
433.0
Memory CD4 T-cell Th17 nTPM: 437.6
Samples: 4
Max nTPM: 505.5
Min nTPM: 378.9
RHH5304_R3670
475.7
RHH5212_R3583
505.5
RHH5240_R3612
390.4
RHH5269_R3641
378.9
Memory CD4 T-cell Th2 nTPM: 485.7
Samples: 4
Max nTPM: 595.2
Min nTPM: 429.4
RHH5305_R3671
429.4
RHH5213_R3584
595.2
RHH5241_R3613
462.8
RHH5270_R3642
455.3
Naive CD4 T-cell nTPM: 375.7
Samples: 4
Max nTPM: 430.1
Min nTPM: 335.4
RHH5306_R3672
389.6
RHH5214_R3585
430.1
RHH5242_R3614
347.5
RHH5271_R3643
335.4
Naive CD8 T-cell nTPM: 359.7
Samples: 4
Max nTPM: 499.8
Min nTPM: 198.3
RHH5201_R3572
499.8
RHH5229_R3601
198.3
RHH5258_R3630
382.2
RHH5287_R3659
358.4
Non-Vd2 gdTCR nTPM: 449.6
Samples: 4
Max nTPM: 605.8
Min nTPM: 329.8
RHH5235_R3607
494.5
RHH5264_R3636
329.8
RHH5207_R3578
605.8
RHH5299_R3665
368.3
T-reg nTPM: 441.7
Samples: 4
Max nTPM: 568.2
Min nTPM: 391.9
RHH5301_R3667
414.3
RHH5237_R3609
392.2
RHH5266_R3638
391.9
RHH5209_R3580
568.2
Terminal effector memory CD4 T-cell nTPM: 424.4
Samples: 2
Max nTPM: 463.1
Min nTPM: 385.6
RHH5243_R3615
385.6
RHH5272_R3644
463.1
Terminal effector memory CD8 T-cell nTPM: 418.1
Samples: 4
Max nTPM: 512.6
Min nTPM: 332.6
RHH5232_R3604
391.9
RHH5204_R3575
512.6
RHH5261_R3633
332.6
RHH5296_R3662
435.4
Vd2 gdTCR nTPM: 401.1
Samples: 4
Max nTPM: 435.3
Min nTPM: 365.3
RHH5234_R3606
413.9
RHH5206_R3577
435.3
RHH5263_R3635
390.0
RHH5298_R3664
365.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
