A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.7
nTPM
Monaco:
101.7
nTPM
Schmiedel:
87.2
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
27.7
HPA sample
nTPM
Classical monocyte nTPM: 24.6
Samples: 6
Max nTPM: 30.5
Min nTPM: 19.4
P10809_1003
27.1
P10809_1020
30.5
P10809_1039
27.0
P10809_1058
19.4
P10809_1080
22.0
P10809_1107
21.5
Intermediate monocyte nTPM: 27.7
Samples: 6
Max nTPM: 41.5
Min nTPM: 17.8
P10809_1004
27.0
P10809_1023
29.3
P10809_1042
29.4
P10809_1061
41.5
P10809_1081
21.3
P10809_1108
17.8
Non-classical monocyte nTPM: 22.4
Samples: 5
Max nTPM: 32.8
Min nTPM: 11.2
P10809_1005
29.3
P10809_1053
32.8
P10809_1072
11.2
P10809_1082
17.5
P10809_1109
21.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
101.7
Monaco sample
nTPM
Classical monocyte nTPM: 99.8
Samples: 4
Max nTPM: 114.5
Min nTPM: 87.8
RHH5313_R3680
87.8
RHH5221_R3593
114.5
RHH5250_R3622
107.1
RHH5279_R3651
89.6
Intermediate monocyte nTPM: 90.8
Samples: 4
Max nTPM: 117.8
Min nTPM: 74.4
RHH5314_R3681
74.4
RHH5222_R3594
117.8
RHH5251_R3623
77.9
RHH5280_R3652
92.9
Non-classical monocyte nTPM: 101.7
Samples: 4
Max nTPM: 123.8
Min nTPM: 82.8
RHH5315_R3682
105.3
RHH5223_R3595
94.8
RHH5252_R3624
123.8
RHH5281_R3653
82.8
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
87.2
Schmiedel sample id
TPM
Classical monocyte TPM: 66.4
Samples: 91
Max TPM: 93.5
Min TPM: 40.2
MONOCYTES_1
93.5
MONOCYTES_2
85.9
MONOCYTES_3
85.7
MONOCYTES_4
85.6
MONOCYTES_5
83.8
MONOCYTES_6
83.5
MONOCYTES_7
82.5
MONOCYTES_8
81.6
MONOCYTES_9
80.0
MONOCYTES_10
79.8
MONOCYTES_11
79.5
MONOCYTES_12
78.7
MONOCYTES_13
77.9
MONOCYTES_14
77.8
MONOCYTES_15
77.2
MONOCYTES_16
77.1
MONOCYTES_17
76.7
MONOCYTES_18
76.4
MONOCYTES_19
76.2
MONOCYTES_20
76.2
MONOCYTES_21
75.9
MONOCYTES_22
75.5
MONOCYTES_23
74.9
MONOCYTES_24
74.7
MONOCYTES_25
74.0
MONOCYTES_26
73.8
MONOCYTES_27
73.5
MONOCYTES_28
72.4
MONOCYTES_29
71.8
MONOCYTES_30
70.7
MONOCYTES_31
70.0
MONOCYTES_32
69.8
MONOCYTES_33
68.9
MONOCYTES_34
68.6
MONOCYTES_35
67.7
MONOCYTES_36
67.5
MONOCYTES_37
67.4
MONOCYTES_38
67.4
MONOCYTES_39
67.2
MONOCYTES_40
67.2
MONOCYTES_41
67.0
MONOCYTES_42
66.9
MONOCYTES_43
66.9
MONOCYTES_44
66.7
MONOCYTES_45
66.6
MONOCYTES_46
66.6
MONOCYTES_47
66.3
MONOCYTES_48
65.9
MONOCYTES_49
65.5
MONOCYTES_50
65.1
MONOCYTES_51
65.1
MONOCYTES_52
64.7
MONOCYTES_53
64.5
MONOCYTES_54
64.4
MONOCYTES_55
63.3
MONOCYTES_56
63.3
MONOCYTES_57
63.0
MONOCYTES_58
62.9
MONOCYTES_59
62.2
MONOCYTES_60
61.8
MONOCYTES_61
61.6
MONOCYTES_62
61.2
MONOCYTES_63
61.1
MONOCYTES_64
60.3
MONOCYTES_65
60.0
MONOCYTES_66
59.9
MONOCYTES_67
59.8
MONOCYTES_68
59.6
MONOCYTES_69
59.2
MONOCYTES_70
59.0
MONOCYTES_71
58.8
MONOCYTES_72
57.4
MONOCYTES_73
57.0
MONOCYTES_74
56.9
MONOCYTES_75
56.1
MONOCYTES_76
55.7
MONOCYTES_77
55.4
MONOCYTES_78
55.4
MONOCYTES_79
55.1
MONOCYTES_80
54.9
MONOCYTES_81
54.6
MONOCYTES_82
52.3
MONOCYTES_83
51.1
MONOCYTES_84
51.0
MONOCYTES_85
50.3
MONOCYTES_86
50.0
MONOCYTES_87
49.6
MONOCYTES_88
49.1
MONOCYTES_89
48.9
MONOCYTES_90
46.5
MONOCYTES_91
40.2
Show allShow less
Non-classical monocyte TPM: 87.2
Samples: 90
Max TPM: 132.6
Min TPM: 65.8
M2_1
132.6
M2_2
120.9
M2_3
118.8
M2_4
114.5
M2_5
113.9
M2_6
112.9
M2_7
108.0
M2_8
107.5
M2_9
107.3
M2_10
106.3
M2_11
105.9
M2_12
101.9
M2_13
101.6
M2_14
101.5
M2_15
100.7
M2_16
100.0
M2_17
100.0
M2_18
98.7
M2_19
96.0
M2_20
95.2
M2_21
94.5
M2_22
94.3
M2_23
93.2
M2_24
92.6
M2_25
92.6
M2_26
91.9
M2_27
91.4
M2_28
91.3
M2_29
90.7
M2_30
90.1
M2_31
89.6
M2_32
89.1
M2_33
89.0
M2_34
88.9
M2_35
88.8
M2_36
88.4
M2_37
88.0
M2_38
87.7
M2_39
87.5
M2_40
87.2
M2_41
87.0
M2_42
86.6
M2_43
85.8
M2_44
84.5
M2_45
83.6
M2_46
83.6
M2_47
83.5
M2_48
83.5
M2_49
83.4
M2_50
83.3
M2_51
83.2
M2_52
82.6
M2_53
82.6
M2_54
81.9
M2_55
81.6
M2_56
81.0
M2_57
80.7
M2_58
80.3
M2_59
80.2
M2_60
79.8
M2_61
79.8
M2_62
79.4
M2_63
79.1
M2_64
79.0
M2_65
78.9
M2_66
78.8
M2_67
78.3
M2_68
78.2
M2_69
77.9
M2_70
77.4
M2_71
77.4
M2_72
77.0
M2_73
76.7
M2_74
76.3
M2_75
75.8
M2_76
75.7
M2_77
75.2
M2_78
75.1
M2_79
74.7
M2_80
74.5
M2_81
73.9
M2_82
72.0
M2_83
70.4
M2_84
70.1
M2_85
69.7
M2_86
68.8
M2_87
67.6
M2_88
67.3
M2_89
66.6
M2_90
65.8
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
