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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:51.6 nTPM
HPA Brain:55.4 nTPM
GTEx:51.6 nTPM
Pig:59.9 nTPM
Mouse:150.6 nTPM
Allen mouse:11.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 40.5
2226 Male, age 75, left hemisphere 49.3
1961 Female, age 42, unknown 31.8
Dorsomedial nucleus
nTPM: 40.6
1989 Male, age 62, unknown 49.7
2041 Female, age 72, unknown 41.3
2017 Female, age 42, unknown 30.8
Lateral hypothalamic area
nTPM: 51.6
2271 Male, age 75, both hemispheres 57.1
1791 Male, age 80, right hemisphere 56.5
2228 Male, age 66, unknown 53.6
2412 Male, age 62, unknown 39.2
Mammillary body
nTPM: 55.4
1923 Female, age 72, unknown 83.3
1948 Female, age 72, unknown 53.3
2413 Male, age 66, unknown 51.8
1834 Female, age 42, unknown 46.4
1945 Male, age 80, right hemisphere 42.2
Paraventricular nucleus
nTPM: 41.3
2700 Male, age 62, unknown 41.3
Preoptic area
nTPM: 39.4
1907 Male, age 80, right hemisphere 42.4
1861 Female, age 42, unknown 39.5
2414 Female, age 72, unknown 36.4
Supraoptic nucleus
nTPM: 43.7
1894 Female, age 72, unknown 45.6
2835 Female, age 72, unknown 44.2
2043 Male, age 62, unknown 41.4
Ventromedial nucleus
nTPM: 33.7
1982 Female, age 72, unknown 37.1
1822 Female, age 42, unknown 30.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 51.6
Samples: 257

Max nTPM: 156.7
Min nTPM: 22.3
Std nTPM: 12.5
Median nTPM: 50.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 156.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 133.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 88.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 84.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 79.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 75.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 73.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 72.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 70.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 68.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 68.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 68.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 67.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 67.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 67.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 66.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 66.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 66.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 66.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 65.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 65.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 64.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 64.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 64.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 64.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 64.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 62.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 62.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 62.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 62.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 62.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 61.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 61.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 61.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 61.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 61.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 60.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 60.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 60.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 60.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 60.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 60.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 59.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 59.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 59.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 59.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 58.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 58.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 58.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 58.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 58.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 58.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 57.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 57.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 57.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 57.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 57.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 57.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 56.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 56.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 56.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 56.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 56.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 56.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 56.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 56.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 56.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 56.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 55.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 55.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 55.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 55.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 55.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 55.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 55.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 55.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 55.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 55.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 55.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 54.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 54.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 54.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 54.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 54.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 54.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 54.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 54.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 54.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 54.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 54.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 54.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 54.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 53.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 53.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 53.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 53.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 53.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 53.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 53.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 52.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 52.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 52.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 52.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 52.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 52.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 52.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 52.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 52.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 52.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 52.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 52.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 52.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 51.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 51.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 51.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 51.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 51.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 51.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 51.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 51.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 51.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 51.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 50.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 50.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 50.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 50.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 50.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 50.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 50.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 49.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 49.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 49.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 49.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 49.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 49.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 49.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 49.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 49.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 49.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 49.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 49.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 49.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 48.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 48.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 48.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 48.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 48.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 48.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 48.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 48.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 47.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 47.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 47.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 47.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 47.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 47.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 47.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 47.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 47.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 46.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 46.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 46.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 46.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 46.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 46.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 46.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 46.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 46.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 45.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 45.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 45.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 45.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 45.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 45.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 45.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 45.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 45.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 45.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 45.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 45.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 45.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 45.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 45.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 44.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 44.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 44.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 44.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 44.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 44.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 44.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 44.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 44.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 44.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 44.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 44.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 44.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 43.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 43.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 43.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 43.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 43.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 43.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 43.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 43.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 43.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 43.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 42.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 42.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 42.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 42.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 42.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 42.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 42.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 42.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 41.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 41.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 41.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 41.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 41.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 41.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 41.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 41.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 41.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 40.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 40.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 40.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 40.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 40.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 40.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 40.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 40.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 40.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 39.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 39.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 39.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 39.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 39.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 38.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 38.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 38.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 38.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 38.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 38.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 38.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 37.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 36.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 36.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 35.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 35.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 35.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 34.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 33.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 32.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 30.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 22.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 59.9
Samples: 4

Max nTPM: 74.3
Min nTPM: 46.5
Sample A Female 74.3
Sample B Female 59.1
Sample C Male 59.8
Sample D Male 46.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 150.6
Samples: 4

Max nTPM: 152.7
Min nTPM: 147.3
Sample A Male 151.2
Sample B Male 151.3
Sample C Female 152.7
Sample D Female 147.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.1
81600144 Antisense, RP_080313_02_E11, Mouse strain C57BL/6J (56 days, male) 12.6
69735216 Antisense, RP_050503_02_C11, Mouse strain C57BL/6J (56 days, male) 9.6

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