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  • TISSUE

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  • FGFR3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:53.2 nTPM
HPA Brain:169.3 nTPM
GTEx:53.2 nTPM
Pig:39.1 nTPM
Mouse:84.8 nTPM
Allen mouse:1.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 115.6
1961 Female, age 42, unknown 139.4
2226 Male, age 75, left hemisphere 91.9
Dorsomedial nucleus
nTPM: 169.3
1989 Male, age 62, unknown 217.0
2017 Female, age 42, unknown 155.3
2041 Female, age 72, unknown 135.5
Lateral hypothalamic area
nTPM: 98.1
1791 Male, age 80, right hemisphere 152.9
2412 Male, age 62, unknown 109.2
2271 Male, age 75, both hemispheres 79.6
2228 Male, age 66, unknown 50.6
Mammillary body
nTPM: 155.6
1945 Male, age 80, right hemisphere 197.4
2413 Male, age 66, unknown 195.8
1834 Female, age 42, unknown 141.9
1923 Female, age 72, unknown 128.5
1948 Female, age 72, unknown 114.3
Paraventricular nucleus
nTPM: 67.2
2700 Male, age 62, unknown 67.2
Preoptic area
nTPM: 162.3
1861 Female, age 42, unknown 224.0
2414 Female, age 72, unknown 145.6
1907 Male, age 80, right hemisphere 117.4
Supraoptic nucleus
nTPM: 123.9
1894 Female, age 72, unknown 128.5
2835 Female, age 72, unknown 125.6
2043 Male, age 62, unknown 117.6
Ventromedial nucleus
nTPM: 146.0
1982 Female, age 72, unknown 152.4
1822 Female, age 42, unknown 139.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 53.2
Samples: 257

Max nTPM: 204.5
Min nTPM: 8.7
Std nTPM: 31.2
Median nTPM: 44.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 204.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 173.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 162.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 158.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 137.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 134.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 133.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 133.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 131.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 128.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 123.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 121.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 120.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 116.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 114.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 113.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 112.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 109.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 107.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 107.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 105.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 103.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 96.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 95.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 94.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 93.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 92.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 92.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 91.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 90.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 89.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 88.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 88.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 85.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 84.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 83.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 83.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 83.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 82.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 81.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 80.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 78.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 78.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 77.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 76.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 75.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 75.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 75.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 72.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 72.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 72.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 71.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 70.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 70.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 69.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 69.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 69.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 68.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 68.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 67.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 66.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 66.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 66.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 65.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 65.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 65.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 65.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 65.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 64.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 64.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 62.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 61.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 61.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 61.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 61.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 60.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 60.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 60.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 60.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 59.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 59.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 59.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 58.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 57.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 57.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 57.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 56.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 56.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 56.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 56.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 56.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 55.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 55.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 55.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 55.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 54.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 54.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 54.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 54.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 53.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 53.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 53.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 52.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 51.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 51.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 50.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 50.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 50.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 49.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 49.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 49.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 48.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 48.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 48.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 48.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 48.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 48.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 48.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 47.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 47.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 47.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 47.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 47.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 47.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 46.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 46.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 45.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 45.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 44.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 44.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 44.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 44.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 44.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 44.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 44.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 44.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 43.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 43.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 43.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 43.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 43.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 42.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 42.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 42.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 42.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 41.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 41.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 41.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 41.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 40.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 40.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 40.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 39.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 39.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 39.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 38.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 38.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 38.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 38.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 38.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 37.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 37.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 37.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 37.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 37.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 37.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 36.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 36.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 36.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 36.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 36.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 35.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 35.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 35.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 35.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 35.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 34.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 34.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 34.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 34.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 34.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 34.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 33.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 33.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 33.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 33.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 33.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 33.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 33.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 33.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 32.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 32.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 32.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 32.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 32.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 31.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 31.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 31.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 31.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 31.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 30.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 30.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 30.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 30.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 30.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 29.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 29.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 29.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 29.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 29.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 28.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 28.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 28.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 28.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 27.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 27.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 27.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 26.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 26.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 25.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 25.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 25.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 24.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 24.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 24.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 23.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 23.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 23.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 23.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 23.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 23.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 22.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 21.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 21.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 21.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 21.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 19.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 19.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 19.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 19.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 17.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 16.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 16.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 16.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 16.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 15.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 14.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 12.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 12.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 11.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 11.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 11.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 11.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 10.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 10.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 8.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 39.1
Samples: 4

Max nTPM: 49.4
Min nTPM: 24.1
Sample A Female 49.4
Sample B Female 48.1
Sample C Male 34.6
Sample D Male 24.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 84.8
Samples: 4

Max nTPM: 87.4
Min nTPM: 79.3
Sample A Male 87.4
Sample B Male 87.2
Sample C Female 79.3
Sample D Female 85.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.1
100146154 Antisense, RP_110421_02_D11, Mouse strain C57BL/6J (56 days, male) 2.0
448 Antisense, RP_Baylor_102781, Mouse strain C57BL/6J (56 days, male) 0.2

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