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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • SIRT2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:60.7 nTPM
GTEx:152.1 nTPM
FANTOM5:141.7 Scaled Tags Per Million
Pig:172.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.7
Sample id Sample description nTPM
Putamen
nTPM: 60.7
2647 Male, age 75, left hemisphere 76.0
2482 Female, age 94, left hemisphere 72.9
1829 Male, age 74, unknown 71.9
1937 Female, age 91, right hemisphere 62.1
2489 Female, age 72, unknown 56.7
2466 Female, age 79, unknown 49.0
1838 Male, age 80, right hemisphere 36.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 152.1
Samples: 254

Max nTPM: 508.7
Min nTPM: 55.7
Std nTPM: 49.1
Median nTPM: 145.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 508.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 363.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 300.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 266.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 265.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 254.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 248.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 246.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 245.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 241.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 232.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 227.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 226.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 226.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 224.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 223.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 221.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 215.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 213.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 212.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 212.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 211.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 211.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 211.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 210.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 209.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 209.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 209.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 208.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 207.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 207.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 204.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 204.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 202.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 201.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 200.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 199.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 195.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 194.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 192.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 191.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 190.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 189.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 188.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 188.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 187.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 187.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 187.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 186.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 186.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 183.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 183.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 183.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 182.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 181.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 181.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 180.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 180.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 180.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 180.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 178.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 177.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 176.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 176.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 176.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 175.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 175.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 174.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 174.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 174.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 174.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 173.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 173.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 173.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 168.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 167.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 166.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 165.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 165.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 165.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 165.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 165.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 164.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 164.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 164.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 164.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 163.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 163.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 163.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 163.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 162.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 162.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 162.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 162.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 162.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 161.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 161.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 160.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 160.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 159.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 157.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 157.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 156.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 156.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 156.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 156.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 155.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 155.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 154.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 152.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 151.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 151.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 150.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 149.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 149.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 149.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 148.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 148.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 148.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 147.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 147.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 147.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 147.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 146.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 146.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 146.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 146.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 145.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 145.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 145.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 145.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 145.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 143.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 143.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 143.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 143.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 142.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 142.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 141.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 140.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 140.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 139.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 139.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 139.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 139.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 138.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 137.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 137.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 137.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 136.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 135.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 135.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 135.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 135.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 133.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 133.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 133.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 133.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 133.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 132.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 132.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 131.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 131.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 131.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 130.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 130.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 130.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 129.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 129.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 128.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 128.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 128.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 128.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 128.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 127.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 127.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 126.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 126.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 124.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 124.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 124.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 124.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 123.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 123.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 123.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 123.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 123.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 122.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 121.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 121.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 120.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 119.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 119.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 119.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 118.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 117.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 116.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 116.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 115.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 114.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 114.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 114.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 114.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 114.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 113.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 113.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 113.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 113.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 112.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 112.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 112.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 112.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 112.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 111.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 111.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 110.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 109.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 109.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 108.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 107.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 105.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 104.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 103.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 102.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 102.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 102.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 101.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 100.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 100.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 99.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 99.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 98.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 97.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 97.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 95.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 94.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 94.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 94.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 92.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 92.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 85.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 83.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 83.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 82.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 81.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 80.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 79.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 77.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 76.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 72.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 70.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 69.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 63.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 55.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

141.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 141.7
FF:10176-103C5 60 years, female 141.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.2
Pig sample Sample description nTPM
Putamen
nTPM: 172.3
Samples: 3

Max nTPM: 204.8
Min nTPM: 118.5
Sample B Female 118.5
Sample C Male 193.5
Sample D Male 204.8

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