We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NUCB2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • NUCB2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

81.355
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:27.8 nTPM
HPA Brain:48.2 nTPM
GTEx:27.8 nTPM
Pig:15.4 nTPM
Mouse:32.2 nTPM
Allen mouse:3.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079781
Hypothalamus mean intensity 81.355
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 21.493
Periventricular hypothalamic nucleus 81.355
Supraoptic nucleus 72.224
Tuberal nucleus 19.795
Ventral tuberomammillary nucleus -
Lateral preoptic area 10.193
Medial preoptic area 10.281
Suprachiasmatic nucleus 13.146
Paraventricular hypothalamic nucleus 7.656
Anterior hypothalamic area, central 10.425
Ventral medial hypothalamic nucleus 20.070
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 53.062
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 4.644
Dorsal medial hypothalamic nucleus 14.669
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 39.8
2226 Male, age 75, left hemisphere 42.1
1961 Female, age 42, unknown 37.5
Dorsomedial nucleus
nTPM: 33.4
2041 Female, age 72, unknown 39.1
1989 Male, age 62, unknown 31.9
2017 Female, age 42, unknown 29.3
Lateral hypothalamic area
nTPM: 36.1
1791 Male, age 80, right hemisphere 38.8
2228 Male, age 66, unknown 36.9
2412 Male, age 62, unknown 35.1
2271 Male, age 75, both hemispheres 33.5
Mammillary body
nTPM: 30.8
1923 Female, age 72, unknown 35.2
1948 Female, age 72, unknown 31.1
1834 Female, age 42, unknown 30.6
2413 Male, age 66, unknown 29.6
1945 Male, age 80, right hemisphere 27.5
Paraventricular nucleus
nTPM: 37.9
2700 Male, age 62, unknown 37.9
Preoptic area
nTPM: 30.9
1907 Male, age 80, right hemisphere 37.6
1861 Female, age 42, unknown 32.1
2414 Female, age 72, unknown 22.9
Supraoptic nucleus
nTPM: 48.2
2835 Female, age 72, unknown 52.0
1894 Female, age 72, unknown 50.0
2043 Male, age 62, unknown 42.5
Ventromedial nucleus
nTPM: 36.3
1982 Female, age 72, unknown 36.9
1822 Female, age 42, unknown 35.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 27.8
Samples: 257

Max nTPM: 90.0
Min nTPM: 14.3
Std nTPM: 8.6
Median nTPM: 26.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 90.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 59.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 57.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 54.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 52.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 49.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 49.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 45.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 45.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 44.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 43.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 43.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 42.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 42.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 42.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 41.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 41.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 41.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 41.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 40.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 39.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 39.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 38.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 38.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 38.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 37.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 37.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 37.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 37.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 36.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 36.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 36.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 36.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 36.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 35.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 35.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 35.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 35.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 35.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 35.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 34.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 34.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 34.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 34.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 34.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 34.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 34.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 34.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 34.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 34.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 33.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 33.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 33.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 33.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 33.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 33.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 33.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 32.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 32.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 32.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 32.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 31.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 31.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 31.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 31.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 31.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 30.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 30.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 30.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 30.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 30.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 30.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 30.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 30.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 30.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 30.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 29.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 29.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 29.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 29.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 29.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 29.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 29.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 29.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 29.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 29.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 29.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 29.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 29.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 29.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 29.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 28.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 28.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 28.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 28.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 28.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 28.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 28.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 28.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 28.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 28.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 28.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 27.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 27.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 27.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 27.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 27.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 27.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 27.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 27.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 27.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 27.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 27.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 27.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 27.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 27.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 26.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 26.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 26.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 26.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 26.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 26.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 26.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 26.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 26.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 26.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 26.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 25.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 25.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 25.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 25.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 25.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 25.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 25.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 25.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 25.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 25.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 25.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 25.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 25.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 25.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 25.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 25.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 24.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 24.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 24.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 24.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 24.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 24.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 24.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 24.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 24.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 24.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 24.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 24.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 24.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 24.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 24.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 24.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 24.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 24.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 24.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 24.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 24.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 23.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 23.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 23.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 23.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 23.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 23.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 23.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 23.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 23.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 23.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 23.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 23.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 23.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 23.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 23.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 23.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 22.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 22.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 22.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 22.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 22.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 22.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 22.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 22.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 22.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 22.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 21.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 21.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 21.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 21.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 21.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 21.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 21.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 21.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 21.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 21.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 21.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 21.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 21.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 21.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 21.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 21.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 21.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 21.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 21.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 21.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 21.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 20.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 20.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 20.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 20.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 20.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 20.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 20.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 20.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 20.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 20.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 19.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 19.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 19.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 19.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 19.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 19.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 19.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 19.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 18.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 18.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 18.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 18.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 18.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 18.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 18.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 18.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 18.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 18.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 17.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 17.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 17.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 17.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 17.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 17.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 17.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 16.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 16.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 16.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 16.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 16.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 15.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 14.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 14.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 14.3
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 15.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 11.2
Sample A Female 18.8
Sample B Female 11.2
Sample C Male 15.1
Sample D Male 16.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 32.2
Samples: 4

Max nTPM: 36.1
Min nTPM: 28.2
Sample A Male 36.1
Sample B Male 34.8
Sample C Female 29.8
Sample D Female 28.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.0
75774683 Antisense, RP_060530_01_D08, Mouse strain C57BL/6J (56 days, male) 4.8
68076976 Antisense, RP_040929_01_B07, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo