A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1.9
nTPM
Monaco:
17.3
nTPM
Schmiedel:
13.8
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1.9
HPA sample
nTPM
Classical monocyte nTPM: 1.9
Samples: 6
Max nTPM: 3.3
Min nTPM: 1.3
P10809_1003
1.3
P10809_1020
3.3
P10809_1039
1.4
P10809_1058
1.9
P10809_1080
2.0
P10809_1107
1.4
Intermediate monocyte nTPM: 1.7
Samples: 6
Max nTPM: 2.6
Min nTPM: 0.0
P10809_1004
1.3
P10809_1023
0.0
P10809_1042
2.4
P10809_1061
2.0
P10809_1081
1.7
P10809_1108
2.6
Non-classical monocyte nTPM: 1.2
Samples: 5
Max nTPM: 2.5
Min nTPM: 0.0
P10809_1005
0.6
P10809_1053
2.2
P10809_1072
0.0
P10809_1082
0.8
P10809_1109
2.5
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
17.3
Monaco sample
nTPM
Classical monocyte nTPM: 17.3
Samples: 4
Max nTPM: 29.2
Min nTPM: 10.0
RHH5313_R3680
10.0
RHH5221_R3593
19.9
RHH5250_R3622
29.2
RHH5279_R3651
10.2
Intermediate monocyte nTPM: 14.3
Samples: 4
Max nTPM: 22.3
Min nTPM: 6.2
RHH5314_R3681
22.3
RHH5222_R3594
12.8
RHH5251_R3623
6.2
RHH5280_R3652
15.9
Non-classical monocyte nTPM: 14.1
Samples: 4
Max nTPM: 25.7
Min nTPM: 5.7
RHH5315_R3682
11.0
RHH5223_R3595
25.7
RHH5252_R3624
14.0
RHH5281_R3653
5.7
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
13.8
Schmiedel sample id
TPM
Classical monocyte TPM: 13.8
Samples: 91
Max TPM: 21.2
Min TPM: 7.1
MONOCYTES_1
21.2
MONOCYTES_2
20.6
MONOCYTES_3
20.1
MONOCYTES_4
19.3
MONOCYTES_5
18.1
MONOCYTES_6
17.8
MONOCYTES_7
17.8
MONOCYTES_8
17.5
MONOCYTES_9
16.7
MONOCYTES_10
16.5
MONOCYTES_11
16.4
MONOCYTES_12
16.3
MONOCYTES_13
16.1
MONOCYTES_14
15.8
MONOCYTES_15
15.8
MONOCYTES_16
15.6
MONOCYTES_17
15.6
MONOCYTES_18
15.5
MONOCYTES_19
15.4
MONOCYTES_20
15.4
MONOCYTES_21
15.2
MONOCYTES_22
15.0
MONOCYTES_23
15.0
MONOCYTES_24
14.9
MONOCYTES_25
14.8
MONOCYTES_26
14.8
MONOCYTES_27
14.8
MONOCYTES_28
14.8
MONOCYTES_29
14.7
MONOCYTES_30
14.6
MONOCYTES_31
14.5
MONOCYTES_32
14.4
MONOCYTES_33
14.4
MONOCYTES_34
14.3
MONOCYTES_35
14.2
MONOCYTES_36
14.2
MONOCYTES_37
14.1
MONOCYTES_38
14.1
MONOCYTES_39
14.0
MONOCYTES_40
14.0
MONOCYTES_41
14.0
MONOCYTES_42
13.9
MONOCYTES_43
13.9
MONOCYTES_44
13.8
MONOCYTES_45
13.8
MONOCYTES_46
13.6
MONOCYTES_47
13.6
MONOCYTES_48
13.6
MONOCYTES_49
13.6
MONOCYTES_50
13.5
MONOCYTES_51
13.4
MONOCYTES_52
13.3
MONOCYTES_53
13.2
MONOCYTES_54
13.2
MONOCYTES_55
13.2
MONOCYTES_56
13.2
MONOCYTES_57
13.1
MONOCYTES_58
13.1
MONOCYTES_59
13.1
MONOCYTES_60
13.1
MONOCYTES_61
12.9
MONOCYTES_62
12.8
MONOCYTES_63
12.8
MONOCYTES_64
12.7
MONOCYTES_65
12.4
MONOCYTES_66
12.4
MONOCYTES_67
12.4
MONOCYTES_68
12.3
MONOCYTES_69
12.2
MONOCYTES_70
12.1
MONOCYTES_71
12.1
MONOCYTES_72
12.0
MONOCYTES_73
11.9
MONOCYTES_74
11.7
MONOCYTES_75
11.6
MONOCYTES_76
11.6
MONOCYTES_77
11.5
MONOCYTES_78
11.4
MONOCYTES_79
11.3
MONOCYTES_80
11.2
MONOCYTES_81
11.2
MONOCYTES_82
10.8
MONOCYTES_83
10.8
MONOCYTES_84
10.8
MONOCYTES_85
10.7
MONOCYTES_86
10.5
MONOCYTES_87
10.5
MONOCYTES_88
9.3
MONOCYTES_89
9.0
MONOCYTES_90
8.2
MONOCYTES_91
7.1
Show allShow less
Non-classical monocyte TPM: 9.9
Samples: 90
Max TPM: 16.5
Min TPM: 3.8
M2_1
16.5
M2_2
15.9
M2_3
15.0
M2_4
15.0
M2_5
14.9
M2_6
13.4
M2_7
13.2
M2_8
13.0
M2_9
13.0
M2_10
12.8
M2_11
12.4
M2_12
12.1
M2_13
11.9
M2_14
11.8
M2_15
11.7
M2_16
11.7
M2_17
11.6
M2_18
11.6
M2_19
11.5
M2_20
11.4
M2_21
11.2
M2_22
11.1
M2_23
11.1
M2_24
11.1
M2_25
10.9
M2_26
10.9
M2_27
10.8
M2_28
10.8
M2_29
10.7
M2_30
10.7
M2_31
10.7
M2_32
10.6
M2_33
10.6
M2_34
10.5
M2_35
10.5
M2_36
10.5
M2_37
10.5
M2_38
10.5
M2_39
10.3
M2_40
10.0
M2_41
9.9
M2_42
9.8
M2_43
9.8
M2_44
9.8
M2_45
9.8
M2_46
9.8
M2_47
9.5
M2_48
9.5
M2_49
9.5
M2_50
9.4
M2_51
9.4
M2_52
9.4
M2_53
9.3
M2_54
9.3
M2_55
9.3
M2_56
9.2
M2_57
9.1
M2_58
9.1
M2_59
9.0
M2_60
8.8
M2_61
8.8
M2_62
8.8
M2_63
8.7
M2_64
8.7
M2_65
8.6
M2_66
8.6
M2_67
8.5
M2_68
8.5
M2_69
8.4
M2_70
8.2
M2_71
8.1
M2_72
8.0
M2_73
8.0
M2_74
7.9
M2_75
7.8
M2_76
7.7
M2_77
7.7
M2_78
7.6
M2_79
7.4
M2_80
7.3
M2_81
7.3
M2_82
7.2
M2_83
7.1
M2_84
6.9
M2_85
6.6
M2_86
6.2
M2_87
5.8
M2_88
5.7
M2_89
4.4
M2_90
3.8
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
