A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.7
nTPM
Monaco:
57.0
nTPM
Schmiedel:
74.7
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
79.7
HPA sample
nTPM
Classical monocyte nTPM: 54.5
Samples: 6
Max nTPM: 68.5
Min nTPM: 40.4
P10809_1003
42.3
P10809_1020
68.5
P10809_1039
67.1
P10809_1058
45.8
P10809_1080
40.4
P10809_1107
62.9
Intermediate monocyte nTPM: 72.1
Samples: 6
Max nTPM: 90.8
Min nTPM: 46.3
P10809_1004
46.3
P10809_1023
72.3
P10809_1042
79.2
P10809_1061
90.8
P10809_1081
53.7
P10809_1108
90.3
Non-classical monocyte nTPM: 79.7
Samples: 5
Max nTPM: 108.1
Min nTPM: 53.0
P10809_1005
67.3
P10809_1053
80.3
P10809_1072
89.9
P10809_1082
53.0
P10809_1109
108.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
57.0
Monaco sample
nTPM
Classical monocyte nTPM: 40.6
Samples: 4
Max nTPM: 70.0
Min nTPM: 16.2
RHH5313_R3680
39.3
RHH5221_R3593
70.0
RHH5250_R3622
16.2
RHH5279_R3651
36.9
Intermediate monocyte nTPM: 57.0
Samples: 4
Max nTPM: 109.0
Min nTPM: 13.5
RHH5314_R3681
109.0
RHH5222_R3594
62.4
RHH5251_R3623
43.2
RHH5280_R3652
13.5
Non-classical monocyte nTPM: 50.3
Samples: 4
Max nTPM: 90.6
Min nTPM: 14.1
RHH5315_R3682
90.6
RHH5223_R3595
20.8
RHH5252_R3624
75.8
RHH5281_R3653
14.1
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
74.7
Schmiedel sample id
TPM
Classical monocyte TPM: 74.4
Samples: 91
Max TPM: 95.9
Min TPM: 47.5
MONOCYTES_1
95.9
MONOCYTES_2
93.0
MONOCYTES_3
91.8
MONOCYTES_4
91.8
MONOCYTES_5
91.4
MONOCYTES_6
90.6
MONOCYTES_7
90.4
MONOCYTES_8
90.1
MONOCYTES_9
89.3
MONOCYTES_10
88.9
MONOCYTES_11
88.9
MONOCYTES_12
87.8
MONOCYTES_13
87.5
MONOCYTES_14
87.1
MONOCYTES_15
86.9
MONOCYTES_16
86.5
MONOCYTES_17
86.2
MONOCYTES_18
86.0
MONOCYTES_19
85.9
MONOCYTES_20
85.6
MONOCYTES_21
85.0
MONOCYTES_22
83.5
MONOCYTES_23
83.5
MONOCYTES_24
83.3
MONOCYTES_25
83.1
MONOCYTES_26
83.0
MONOCYTES_27
82.6
MONOCYTES_28
81.6
MONOCYTES_29
81.6
MONOCYTES_30
81.1
MONOCYTES_31
80.9
MONOCYTES_32
79.9
MONOCYTES_33
79.5
MONOCYTES_34
79.3
MONOCYTES_35
79.2
MONOCYTES_36
78.2
MONOCYTES_37
78.0
MONOCYTES_38
77.8
MONOCYTES_39
77.6
MONOCYTES_40
77.4
MONOCYTES_41
76.9
MONOCYTES_42
76.6
MONOCYTES_43
76.6
MONOCYTES_44
76.5
MONOCYTES_45
76.3
MONOCYTES_46
75.9
MONOCYTES_47
75.2
MONOCYTES_48
74.9
MONOCYTES_49
74.9
MONOCYTES_50
74.6
MONOCYTES_51
74.4
MONOCYTES_52
73.9
MONOCYTES_53
73.2
MONOCYTES_54
73.1
MONOCYTES_55
72.1
MONOCYTES_56
72.1
MONOCYTES_57
71.9
MONOCYTES_58
71.8
MONOCYTES_59
70.9
MONOCYTES_60
70.0
MONOCYTES_61
69.5
MONOCYTES_62
68.9
MONOCYTES_63
68.4
MONOCYTES_64
68.1
MONOCYTES_65
67.7
MONOCYTES_66
67.4
MONOCYTES_67
66.6
MONOCYTES_68
65.9
MONOCYTES_69
65.8
MONOCYTES_70
65.5
MONOCYTES_71
64.9
MONOCYTES_72
63.1
MONOCYTES_73
62.9
MONOCYTES_74
62.2
MONOCYTES_75
62.0
MONOCYTES_76
61.7
MONOCYTES_77
61.1
MONOCYTES_78
60.7
MONOCYTES_79
60.1
MONOCYTES_80
60.1
MONOCYTES_81
59.7
MONOCYTES_82
58.5
MONOCYTES_83
57.8
MONOCYTES_84
57.4
MONOCYTES_85
56.0
MONOCYTES_86
53.5
MONOCYTES_87
53.3
MONOCYTES_88
52.1
MONOCYTES_89
49.7
MONOCYTES_90
48.8
MONOCYTES_91
47.5
Show allShow less
Non-classical monocyte TPM: 74.7
Samples: 90
Max TPM: 111.4
Min TPM: 28.5
M2_1
111.4
M2_2
102.7
M2_3
100.1
M2_4
98.9
M2_5
98.9
M2_6
97.3
M2_7
96.2
M2_8
94.5
M2_9
93.3
M2_10
92.3
M2_11
91.7
M2_12
91.2
M2_13
89.8
M2_14
89.0
M2_15
87.7
M2_16
87.6
M2_17
87.4
M2_18
87.3
M2_19
87.0
M2_20
86.4
M2_21
86.1
M2_22
86.1
M2_23
85.8
M2_24
85.7
M2_25
85.7
M2_26
85.2
M2_27
85.0
M2_28
84.5
M2_29
84.4
M2_30
84.3
M2_31
84.0
M2_32
83.8
M2_33
83.6
M2_34
83.6
M2_35
83.2
M2_36
83.2
M2_37
83.1
M2_38
82.8
M2_39
82.8
M2_40
81.4
M2_41
79.2
M2_42
78.8
M2_43
77.5
M2_44
77.4
M2_45
77.2
M2_46
76.7
M2_47
76.6
M2_48
76.3
M2_49
76.2
M2_50
76.1
M2_51
76.0
M2_52
75.2
M2_53
75.1
M2_54
74.7
M2_55
74.7
M2_56
74.3
M2_57
73.4
M2_58
71.2
M2_59
71.2
M2_60
70.6
M2_61
70.5
M2_62
70.5
M2_63
69.8
M2_64
69.7
M2_65
69.2
M2_66
69.1
M2_67
68.9
M2_68
66.8
M2_69
66.4
M2_70
65.9
M2_71
65.7
M2_72
62.7
M2_73
60.0
M2_74
59.9
M2_75
59.6
M2_76
59.4
M2_77
53.3
M2_78
52.7
M2_79
49.5
M2_80
48.5
M2_81
47.9
M2_82
45.6
M2_83
45.2
M2_84
44.8
M2_85
44.6
M2_86
43.1
M2_87
38.1
M2_88
37.1
M2_89
30.4
M2_90
28.5
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
