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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:78.4 nTPM
HPA Brain:89.3 nTPM
GTEx:78.4 nTPM
Pig:125.4 nTPM
Mouse:279.7 nTPM
Allen mouse:20.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 89.3
2226 Male, age 75, left hemisphere 112.9
1961 Female, age 42, unknown 65.8
Dorsomedial nucleus
nTPM: 68.3
1989 Male, age 62, unknown 84.1
2041 Female, age 72, unknown 68.4
2017 Female, age 42, unknown 52.6
Lateral hypothalamic area
nTPM: 89.3
2228 Male, age 66, unknown 109.2
2412 Male, age 62, unknown 84.0
1791 Male, age 80, right hemisphere 83.3
2271 Male, age 75, both hemispheres 80.7
Mammillary body
nTPM: 73.9
1923 Female, age 72, unknown 87.6
2413 Male, age 66, unknown 84.0
1834 Female, age 42, unknown 73.1
1948 Female, age 72, unknown 68.5
1945 Male, age 80, right hemisphere 56.4
Paraventricular nucleus
nTPM: 86.3
2700 Male, age 62, unknown 86.3
Preoptic area
nTPM: 73.1
1861 Female, age 42, unknown 78.9
1907 Male, age 80, right hemisphere 77.9
2414 Female, age 72, unknown 62.7
Supraoptic nucleus
nTPM: 67.4
2835 Female, age 72, unknown 92.3
1894 Female, age 72, unknown 55.6
2043 Male, age 62, unknown 54.3
Ventromedial nucleus
nTPM: 74.4
1822 Female, age 42, unknown 76.5
1982 Female, age 72, unknown 72.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 78.4
Samples: 257

Max nTPM: 128.4
Min nTPM: 34.3
Std nTPM: 20.8
Median nTPM: 79.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 128.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 122.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 120.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 118.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 116.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 115.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 115.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 114.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 114.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 113.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 113.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 112.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 112.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 110.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 109.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 109.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 109.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 108.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 108.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 108.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 107.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 107.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 107.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 107.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 105.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 105.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 104.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 104.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 104.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 104.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 104.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 104.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 104.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 103.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 103.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 101.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 101.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 100.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 100.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 99.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 99.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 98.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 98.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 98.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 98.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 98.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 97.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 97.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 97.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 96.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 96.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 96.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 96.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 96.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 96.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 96.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 96.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 95.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 95.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 95.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 95.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 94.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 94.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 94.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 93.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 93.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 93.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 92.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 92.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 92.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 92.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 92.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 92.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 91.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 91.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 91.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 90.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 90.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 90.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 90.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 90.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 90.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 90.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 90.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 89.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 89.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 89.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 88.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 88.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 88.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 88.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 87.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 86.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 86.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 86.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 86.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 86.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 86.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 86.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 86.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 86.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 85.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 85.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 84.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 84.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 84.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 83.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 83.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 83.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 83.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 83.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 82.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 82.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 81.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 81.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 81.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 81.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 81.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 81.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 81.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 80.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 80.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 80.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 80.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 80.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 80.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 80.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 79.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 79.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 79.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 79.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 79.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 79.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 79.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 78.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 78.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 77.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 77.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 77.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 77.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 77.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 76.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 76.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 76.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 75.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 75.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 74.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 74.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 74.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 74.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 74.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 74.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 74.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 74.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 73.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 73.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 72.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 72.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 72.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 72.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 72.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 72.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 72.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 71.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 71.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 71.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 71.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 70.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 70.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 70.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 70.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 69.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 69.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 68.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 68.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 68.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 67.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 67.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 67.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 67.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 67.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 67.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 67.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 67.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 66.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 66.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 65.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 65.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 64.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 64.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 64.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 64.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 64.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 64.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 63.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 63.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 63.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 62.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 62.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 62.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 61.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 61.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 60.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 60.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 59.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 58.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 58.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 58.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 58.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 58.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 57.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 56.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 56.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 56.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 56.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 55.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 55.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 55.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 54.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 53.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 53.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 53.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 53.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 53.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 52.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 51.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 51.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 50.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 50.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 49.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 49.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 48.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 48.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 47.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 47.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 46.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 46.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 44.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 42.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 42.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 41.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 41.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 40.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 40.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 40.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 40.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 39.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 39.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 38.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 38.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 37.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 36.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 36.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 36.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 36.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 35.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 34.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 125.4
Samples: 4

Max nTPM: 156.5
Min nTPM: 110.6
Sample A Female 156.5
Sample B Female 115.7
Sample C Male 118.9
Sample D Male 110.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

279.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 279.7
Samples: 4

Max nTPM: 287.0
Min nTPM: 269.6
Sample A Male 286.5
Sample B Male 269.6
Sample C Female 287.0
Sample D Female 275.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 20.5
532575 Antisense, RP_040810_02_B09, Mouse strain C57BL/6J (56 days, male) 20.5

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