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  • PTPN18
IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:3.1 nTPM
Monaco:45.0 nTPM
Schmiedel:225.2 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

3.1
HPA sample nTPM
NK-cell
nTPM: 3.2
Samples: 6

Max nTPM: 5.5
Min nTPM: 0.0
P10809_1013 2.7
P10809_1033 3.4
P10809_1052 4.7
P10809_1071 2.6
P10809_1093 0.0
P10809_1103 5.5

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

45.0
Monaco sample nTPM
NK-cell
nTPM: 45.1
Samples: 4

Max nTPM: 57.8
Min nTPM: 31.0
RHH5316_R3683 57.8
RHH5224_R3596 47.1
RHH5253_R3625 44.3
RHH5282_R3654 31.0

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

225.2
Schmiedel sample id TPM
NK-cell
TPM: 225.2
Samples: 90

Max TPM: 319.6
Min TPM: 136.0
NK_1 319.6
NK_2 306.2
NK_3 301.9
NK_4 293.9
NK_5 293.5
NK_6 293.3
NK_7 292.8
NK_8 291.9
NK_9 290.1
NK_10 285.5
NK_11 284.4
NK_12 273.8
NK_13 270.9
NK_14 270.2
NK_15 270.1
NK_16 261.3
NK_17 259.1
NK_18 256.6
NK_19 256.3
NK_20 255.0
NK_21 254.2
NK_22 252.9
NK_23 252.1
NK_24 252.0
NK_25 252.0
NK_26 251.3
NK_27 248.9
NK_28 248.0
NK_29 246.7
NK_30 245.9
NK_31 240.9
NK_32 240.7
NK_33 239.4
NK_34 239.4
NK_35 236.2
NK_36 235.6
NK_37 234.1
NK_38 232.8
NK_39 232.8
NK_40 231.7
NK_41 231.4
NK_42 230.2
NK_43 228.0
NK_44 227.8
NK_45 227.5
NK_46 226.1
NK_47 225.7
NK_48 224.6
NK_49 223.2
NK_50 221.2
NK_51 220.4
NK_52 219.7
NK_53 216.8
NK_54 216.3
NK_55 215.5
NK_56 214.7
NK_57 212.1
NK_58 210.9
NK_59 210.7
NK_60 210.3
NK_61 210.0
NK_62 209.8
NK_63 209.3
NK_64 202.5
NK_65 201.0
NK_66 199.1
NK_67 196.9
NK_68 195.7
NK_69 193.6
NK_70 193.5
NK_71 191.3
NK_72 190.6
NK_73 189.2
NK_74 185.8
NK_75 185.7
NK_76 172.4
NK_77 172.0
NK_78 171.8
NK_79 171.5
NK_80 169.7
NK_81 168.8
NK_82 168.4
NK_83 162.6
NK_84 161.1
NK_85 160.4
NK_86 155.0
NK_87 153.2
NK_88 144.9
NK_89 138.1
NK_90 136.0
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