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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • TFRC
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:7.7 nTPM
GTEx:13.8 nTPM
FANTOM5:37.5 Scaled Tags Per Million
Macaque:20.4 nTPM
Pig:51.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.7
Sample id Sample description nTPM
Putamen
nTPM: 7.7
2647 Male, age 75, left hemisphere 11.1
2489 Female, age 72, unknown 9.5
2466 Female, age 79, unknown 8.2
1838 Male, age 80, right hemisphere 6.7
1937 Female, age 91, right hemisphere 6.4
1829 Male, age 74, unknown 6.0
2482 Female, age 94, left hemisphere 5.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 13.8
Samples: 254

Max nTPM: 63.3
Min nTPM: 3.0
Std nTPM: 8.5
Median nTPM: 11.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 63.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 56.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 52.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 42.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 41.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 38.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 33.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 32.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 32.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 31.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 31.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 31.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 29.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 28.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 28.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 28.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 27.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 27.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 26.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 26.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 26.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 25.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 25.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 24.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 24.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 24.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 24.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 24.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 23.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 23.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 22.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 22.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 21.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 21.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 21.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 20.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 20.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 20.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 20.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 20.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 19.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 19.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 19.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 19.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 19.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 19.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 19.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 19.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 18.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 18.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 18.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 18.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 17.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 17.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 17.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 17.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 17.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 17.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 17.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 16.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 16.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 16.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 16.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 16.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 16.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 16.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 15.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 15.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 15.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 15.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 15.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 15.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 15.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 15.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 15.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 14.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 14.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 14.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 14.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 14.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 14.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 14.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 14.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 14.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 14.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 14.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 14.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 13.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 13.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 13.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 13.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 13.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 13.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 13.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 13.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 13.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 13.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 13.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 13.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 13.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 13.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 12.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 12.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 12.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 12.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 12.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 12.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 12.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 12.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 12.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 12.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 12.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 11.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 11.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 11.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 11.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 11.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 11.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 11.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 11.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 11.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 11.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 11.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 11.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 11.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 11.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 11.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 11.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 11.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 11.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 10.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 10.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 10.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 10.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 10.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 10.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 10.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 10.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 10.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 10.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 10.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 10.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 10.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 10.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 10.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 10.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 10.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 9.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 9.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 9.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 9.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 9.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 9.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 9.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 9.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 9.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 9.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 9.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 9.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 9.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 9.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 9.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 9.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 9.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 9.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 9.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 9.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 9.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 9.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 9.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 8.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 8.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 8.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 8.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 8.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 8.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 8.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 8.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 8.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 8.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 8.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 8.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 8.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 8.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 7.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 7.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 7.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 7.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 7.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 7.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 7.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 7.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 7.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 7.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 7.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 7.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 7.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 7.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 7.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 7.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 7.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 7.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 7.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 7.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 7.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 7.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 7.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 7.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 7.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 7.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 7.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 7.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 7.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 6.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 6.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 6.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 6.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 6.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 6.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 6.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 6.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 6.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 6.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 6.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 6.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 6.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 6.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 5.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 5.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 5.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 5.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 5.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 5.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 5.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 5.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 5.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 4.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 3.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 3.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

37.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 37.5
FF:10176-103C5 60 years, female 37.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.4
Macaque sample Sample description nTPM
Putamen
nTPM: 20.4
Samples: 2

Max nTPM: 21.6
Min nTPM: 19.2
Sample A 21.6
Sample B 19.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.1
Pig sample Sample description nTPM
Putamen
nTPM: 51.0
Samples: 3

Max nTPM: 74.3
Min nTPM: 38.9
Sample B Female 39.9
Sample C Male 74.3
Sample D Male 38.9

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