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  • TISSUE

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  • AP1M1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:44.1 nTPM
HPA Brain:74.3 nTPM
GTEx:44.1 nTPM
Pig:47.4 nTPM
Mouse:57.7 nTPM
Allen mouse:0.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 58.2
2226 Male, age 75, left hemisphere 63.5
1961 Female, age 42, unknown 53.0
Dorsomedial nucleus
nTPM: 56.3
1989 Male, age 62, unknown 65.1
2041 Female, age 72, unknown 54.4
2017 Female, age 42, unknown 49.3
Lateral hypothalamic area
nTPM: 74.3
2271 Male, age 75, both hemispheres 86.7
1791 Male, age 80, right hemisphere 79.9
2228 Male, age 66, unknown 76.4
2412 Male, age 62, unknown 54.4
Mammillary body
nTPM: 56.7
1923 Female, age 72, unknown 69.1
2413 Male, age 66, unknown 57.7
1948 Female, age 72, unknown 56.3
1945 Male, age 80, right hemisphere 54.4
1834 Female, age 42, unknown 45.8
Paraventricular nucleus
nTPM: 53.4
2700 Male, age 62, unknown 53.4
Preoptic area
nTPM: 60.4
1907 Male, age 80, right hemisphere 65.8
2414 Female, age 72, unknown 62.0
1861 Female, age 42, unknown 53.3
Supraoptic nucleus
nTPM: 56.4
2835 Female, age 72, unknown 63.8
1894 Female, age 72, unknown 53.4
2043 Male, age 62, unknown 51.9
Ventromedial nucleus
nTPM: 52.4
1982 Female, age 72, unknown 53.6
1822 Female, age 42, unknown 51.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 44.1
Samples: 257

Max nTPM: 102.1
Min nTPM: 21.1
Std nTPM: 11.1
Median nTPM: 43.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 102.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 95.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 87.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 84.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 79.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 66.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 64.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 64.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 62.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 61.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 60.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 60.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 60.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 59.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 59.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 58.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 58.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 58.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 57.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 57.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 57.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 57.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 56.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 56.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 56.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 56.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 55.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 55.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 55.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 55.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 55.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 54.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 54.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 54.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 54.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 54.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 53.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 53.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 52.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 52.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 52.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 52.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 52.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 52.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 52.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 52.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 52.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 52.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 51.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 51.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 51.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 51.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 51.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 51.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 51.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 51.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 51.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 51.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 51.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 50.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 50.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 50.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 50.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 50.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 50.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 50.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 50.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 50.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 49.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 49.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 49.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 49.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 49.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 49.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 49.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 49.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 49.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 49.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 49.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 49.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 49.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 48.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 48.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 48.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 48.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 48.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 48.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 48.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 48.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 48.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 47.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 47.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 47.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 47.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 47.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 47.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 46.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 46.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 46.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 46.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 46.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 46.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 46.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 45.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 45.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 45.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 45.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 45.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 45.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 45.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 45.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 45.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 45.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 45.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 44.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 44.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 44.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 44.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 44.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 44.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 44.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 44.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 43.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 43.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 43.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 43.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 43.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 43.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 43.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 43.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 43.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 42.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 42.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 42.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 42.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 42.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 42.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 42.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 42.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 42.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 42.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 41.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 41.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 41.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 41.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 41.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 41.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 41.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 41.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 41.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 41.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 41.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 41.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 41.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 41.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 41.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 40.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 40.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 40.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 40.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 40.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 40.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 40.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 40.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 40.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 40.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 39.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 39.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 39.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 39.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 39.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 39.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 39.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 39.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 39.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 39.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 38.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 38.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 38.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 38.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 38.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 38.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 38.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 38.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 38.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 38.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 38.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 37.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 37.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 37.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 37.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 37.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 37.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 37.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 36.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 36.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 36.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 36.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 36.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 35.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 35.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 35.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 35.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 35.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 35.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 35.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 34.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 34.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 34.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 34.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 34.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 33.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 33.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 33.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 33.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 33.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 33.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 33.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 33.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 33.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 32.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 32.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 32.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 32.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 32.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 32.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 32.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 32.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 32.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 31.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 31.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 30.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 30.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 29.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 29.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 29.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 29.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 29.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 29.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 28.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 28.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 27.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 27.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 27.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 27.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 26.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 26.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 26.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 25.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 25.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 25.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 24.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 24.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 24.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 22.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 21.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 47.4
Samples: 4

Max nTPM: 55.6
Min nTPM: 41.0
Sample A Female 55.6
Sample B Female 45.2
Sample C Male 47.7
Sample D Male 41.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 57.7
Samples: 4

Max nTPM: 58.8
Min nTPM: 56.9
Sample A Male 57.9
Sample B Male 58.8
Sample C Female 56.9
Sample D Female 57.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.8
71610778 Antisense, RP_050927_01_G07, Mouse strain C57BL/6J (56 days, male) 0.8

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