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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
169.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 169.1
Samples: 105
Max nTPM: 317.2
Min nTPM: 45.1
Std nTPM: 61.0
Median nTPM:
379_1
60 years, male
317.2
322_1
76 years, male
299.3
386_1
76 years, male
293.8
377_1
82 years, female
290.9
163_1
78 years, male
277.4
218_1
71 years, female
268.4
316_1
62 years, male
258.1
452_1
88 years, female
255.4
177_1
74 years, male
252.3
354_1
81 years, female
243.4
243_1
75 years, male
240.8
321_1
62 years, female
237.2
375_1
74 years, female
234.0
353_1
82 years, female
232.9
506_1
65 years, male
232.1
319_1
81 years, male
231.0
295_1
61 years, female
230.0
352_1
62 years, male
230.0
335_1
73 years, female
227.9
189_1
76 years, male
224.5
356_1
87 years, female
224.1
447_1
81 years, male
222.8
173_1
67 years, male
222.7
351_1
91 years, male
218.4
376_1
75 years, female
215.1
318_1
68 years, male
214.0
404_1
82 years, female
211.5
518_1
75 years, female
210.6
172_1
72 years, female
210.3
349_1
83 years, male
209.7
237_1
82 years, male
203.4
406_1
79 years, male
203.3
320_1
89 years, female
201.9
229_1
69 years, female
200.1
425_1
59 years, female
199.8
293_1
68 years, female
197.0
396_1
62 years, male
196.3
517_1
88 years, male
193.8
246_1
77 years, male
193.3
350_1
84 years, female
190.6
348_1
84 years, male
189.4
251_1
78 years, male
188.9
292_1
71 years, male
186.5
286_1
68 years, female
182.8
288_1
66 years, female
182.2
384_1
83 years, male
182.2
480_1
63 years, male
180.8
264_1
73 years, female
179.2
317_1
60 years, male
178.7
6_1
73 years, female
178.5
503_1
68 years, male
176.8
2_1
77 years, female
176.2
266_1
85 years, male
176.2
405_1
91 years, male
174.8
17_1
71 years, male
174.6
355_1
70 years, female
174.3
526_1
61 years, male
167.5
291_1
76 years, male
166.2
394_1
75 years, female
165.7
265_1
87 years, male
164.9
254_1
77 years, female
162.7
307_1
66 years, female
161.2
468_1
89 years, male
157.4
347_1
72 years, male
157.2
389_1
86 years, female
156.9
217_1
76 years, male
156.8
4_1
88 years, female
150.2
18_1
88 years, male
144.4
315_1
62 years, female
143.4
324_1
76 years, male
142.3
120_1
70 years, female
141.0
311_1
78 years, male
140.0
145_1
84 years, male
138.8
139_1
64 years, female
133.5
126_1
63 years, male
131.7
153_1
70 years, female
130.5
313_1
79 years, female
127.5
501_1
88 years, male
125.9
314_1
67 years, male
124.9
499_1
55 years, female
117.5
142_1
61 years, female
109.7
115_1
83 years, male
108.6
137_1
83 years, male
108.1
109_1
81 years, female
105.9
43_1
64 years, female
102.1
35_1
74 years, female
101.1
466_1
57 years, female
100.2
81_1
67 years, male
100.0
9_1
66 years, female
97.4
495_1
57 years, female
96.6
415_1
77 years, female
96.4
414_1
84 years, female
95.9
117_1
61 years, male
92.2
41_1
94 years, female
88.4
99_1
64 years, male
87.2
162_1
79 years, female
86.0
413_1
59 years, female
80.4
32_1
67 years, male
77.9
42_1
85 years, male
75.2
308_1
70 years, female
66.6
119_1
70 years, female
65.8
89_1
63 years, male
59.3
149_1
88 years, male
52.0
490_1
67 years, female
50.6
491_1
89 years, female
45.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.