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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SNCB
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

122.606
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:188.2 nTPM
HPA Brain:246.5 nTPM
GTEx:188.2 nTPM
Pig:178.9 nTPM
Mouse:247.1 nTPM
Allen mouse:18.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA035876
Hypothalamus mean intensity 122.606
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 98.865
Mammillary nucleus 69.671
Periventricular hypothalamic nucleus 111.626
Supraoptic nucleus 37.114
Tuberal nucleus 81.225
Ventral tuberomammillary nucleus -
Lateral preoptic area 116.591
Medial preoptic area 91.047
Suprachiasmatic nucleus 82.581
Paraventricular hypothalamic nucleus 97.061
Anterior hypothalamic area, central 62.299
Ventral medial hypothalamic nucleus 88.848
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 122.606
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 97.934
Dorsal medial hypothalamic nucleus 96.330
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 112.7
2226 Male, age 75, left hemisphere 149.3
1961 Female, age 42, unknown 76.2
Dorsomedial nucleus
nTPM: 163.1
1989 Male, age 62, unknown 288.5
2017 Female, age 42, unknown 110.0
2041 Female, age 72, unknown 90.9
Lateral hypothalamic area
nTPM: 246.5
2228 Male, age 66, unknown 526.6
2271 Male, age 75, both hemispheres 167.9
1791 Male, age 80, right hemisphere 159.6
2412 Male, age 62, unknown 131.8
Mammillary body
nTPM: 217.0
1923 Female, age 72, unknown 347.2
2413 Male, age 66, unknown 246.6
1948 Female, age 72, unknown 177.7
1834 Female, age 42, unknown 173.1
1945 Male, age 80, right hemisphere 140.5
Paraventricular nucleus
nTPM: 156.9
2700 Male, age 62, unknown 156.9
Preoptic area
nTPM: 153.3
1907 Male, age 80, right hemisphere 209.8
1861 Female, age 42, unknown 142.6
2414 Female, age 72, unknown 107.5
Supraoptic nucleus
nTPM: 89.5
2835 Female, age 72, unknown 137.6
1894 Female, age 72, unknown 73.0
2043 Male, age 62, unknown 58.0
Ventromedial nucleus
nTPM: 104.9
1982 Female, age 72, unknown 124.5
1822 Female, age 42, unknown 85.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 188.2
Samples: 257

Max nTPM: 535.6
Min nTPM: 10.6
Std nTPM: 96.0
Median nTPM: 174.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 535.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 535.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 534.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 520.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 512.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 504.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 498.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 431.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 428.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 403.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 377.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 364.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 343.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 341.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 340.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 339.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 323.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 318.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 317.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 309.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 308.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 307.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 305.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 298.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 297.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 291.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 290.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 288.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 283.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 283.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 282.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 281.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 280.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 275.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 274.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 270.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 268.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 267.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 267.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 266.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 264.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 263.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 263.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 263.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 262.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 262.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 261.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 261.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 261.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 261.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 261.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 261.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 259.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 258.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 257.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 255.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 255.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 251.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 249.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 247.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 247.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 247.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 247.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 243.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 243.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 243.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 242.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 242.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 239.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 237.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 236.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 235.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 233.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 232.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 230.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 229.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 227.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 227.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 227.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 226.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 225.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 225.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 219.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 218.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 218.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 217.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 215.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 215.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 213.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 212.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 210.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 209.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 208.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 207.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 204.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 203.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 202.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 201.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 201.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 199.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 197.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 196.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 196.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 195.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 195.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 194.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 193.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 193.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 193.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 192.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 192.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 190.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 190.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 189.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 186.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 185.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 183.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 183.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 182.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 181.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 180.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 179.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 178.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 176.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 175.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 175.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 175.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 174.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 174.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 174.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 174.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 173.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 172.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 172.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 172.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 171.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 171.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 170.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 170.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 168.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 168.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 165.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 165.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 163.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 160.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 159.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 159.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 158.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 156.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 156.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 155.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 155.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 154.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 154.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 152.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 151.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 148.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 145.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 144.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 142.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 142.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 142.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 141.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 141.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 140.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 140.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 140.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 140.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 139.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 139.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 139.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 138.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 137.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 136.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 133.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 132.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 132.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 132.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 131.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 130.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 130.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 129.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 129.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 128.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 127.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 127.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 126.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 124.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 122.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 121.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 120.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 120.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 120.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 119.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 117.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 117.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 116.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 115.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 114.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 114.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 114.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 114.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 111.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 109.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 109.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 108.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 108.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 107.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 105.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 104.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 103.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 102.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 102.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 101.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 101.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 100.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 100.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 99.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 98.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 97.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 96.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 96.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 95.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 95.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 94.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 89.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 89.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 83.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 83.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 83.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 82.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 81.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 78.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 77.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 76.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 76.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 75.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 75.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 75.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 73.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 72.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 68.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 66.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 65.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 64.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 57.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 52.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 50.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 48.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 48.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 44.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 41.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 41.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 40.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 21.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 10.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 178.9
Samples: 4

Max nTPM: 231.9
Min nTPM: 145.0
Sample A Female 231.9
Sample B Female 184.3
Sample C Male 154.3
Sample D Male 145.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 247.1
Samples: 4

Max nTPM: 264.3
Min nTPM: 227.9
Sample A Male 247.8
Sample B Male 264.3
Sample C Female 248.4
Sample D Female 227.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.6
100144408 Antisense, RP_110407_01_G07, Mouse strain C57BL/6J (56 days, male) 18.6

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