A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4.6
nTPM
Monaco:
133.7
nTPM
Schmiedel:
516.7
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
4.6
HPA sample
nTPM
NK-cell nTPM: 4.6
Samples: 6
Max nTPM: 7.4
Min nTPM: 1.3
P10809_1013
5.6
P10809_1033
6.4
P10809_1052
7.4
P10809_1071
3.8
P10809_1093
1.3
P10809_1103
2.9
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
133.7
Monaco sample
nTPM
NK-cell nTPM: 133.7
Samples: 4
Max nTPM: 197.2
Min nTPM: 103.2
RHH5316_R3683
103.2
RHH5224_R3596
197.2
RHH5253_R3625
120.8
RHH5282_R3654
113.5
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
516.7
Schmiedel sample id
TPM
NK-cell TPM: 516.7
Samples: 90
Max TPM: 816.5
Min TPM: 315.3
NK_1
816.5
NK_2
761.1
NK_3
756.4
NK_4
717.7
NK_5
706.7
NK_6
695.2
NK_7
695.1
NK_8
686.4
NK_9
660.2
NK_10
642.7
NK_11
641.0
NK_12
638.5
NK_13
627.2
NK_14
624.0
NK_15
618.5
NK_16
614.7
NK_17
611.5
NK_18
603.0
NK_19
600.8
NK_20
599.8
NK_21
599.7
NK_22
590.9
NK_23
590.9
NK_24
586.8
NK_25
579.8
NK_26
573.8
NK_27
572.7
NK_28
571.2
NK_29
569.2
NK_30
567.6
NK_31
563.1
NK_32
560.0
NK_33
554.2
NK_34
548.2
NK_35
546.4
NK_36
546.2
NK_37
537.1
NK_38
536.7
NK_39
530.3
NK_40
520.7
NK_41
517.7
NK_42
509.2
NK_43
506.2
NK_44
504.1
NK_45
501.9
NK_46
498.8
NK_47
496.1
NK_48
495.2
NK_49
494.6
NK_50
490.9
NK_51
489.9
NK_52
488.1
NK_53
485.7
NK_54
485.4
NK_55
477.5
NK_56
475.1
NK_57
474.5
NK_58
471.7
NK_59
463.9
NK_60
454.9
NK_61
452.0
NK_62
446.1
NK_63
444.2
NK_64
441.6
NK_65
440.5
NK_66
438.5
NK_67
438.3
NK_68
437.3
NK_69
432.4
NK_70
430.9
NK_71
430.8
NK_72
430.0
NK_73
428.8
NK_74
428.6
NK_75
424.3
NK_76
422.2
NK_77
420.3
NK_78
405.1
NK_79
403.9
NK_80
402.2
NK_81
395.7
NK_82
384.1
NK_83
383.4
NK_84
376.7
NK_85
365.4
NK_86
357.6
NK_87
337.1
NK_88
329.1
NK_89
319.6
NK_90
315.3
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.