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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • DCX
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

65.590
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1.9 nTPM
HPA Brain:12.6 nTPM
GTEx:1.9 nTPM
Pig:14.9 nTPM
Mouse:5.0 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA036121
Hypothalamus mean intensity 65.590
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 17.530
Periventricular hypothalamic nucleus 38.378
Supraoptic nucleus 46.786
Tuberal nucleus 44.316
Ventral tuberomammillary nucleus 34.364
Lateral preoptic area -
Medial preoptic area -
Suprachiasmatic nucleus 29.232
Paraventricular hypothalamic nucleus 44.968
Anterior hypothalamic area, central 18.851
Ventral medial hypothalamic nucleus 33.705
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 65.590
Arcuate nucleus* -
Peduncular part of lateral hypothalmus -
Dorsal medial hypothalamic nucleus 32.012
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 12.6
1961 Female, age 42, unknown 13.7
2226 Male, age 75, left hemisphere 11.4
Dorsomedial nucleus
nTPM: 8.3
2041 Female, age 72, unknown 10.4
2017 Female, age 42, unknown 9.6
1989 Male, age 62, unknown 5.0
Lateral hypothalamic area
nTPM: 10.7
2412 Male, age 62, unknown 13.2
2228 Male, age 66, unknown 11.5
2271 Male, age 75, both hemispheres 10.6
1791 Male, age 80, right hemisphere 7.6
Mammillary body
nTPM: 5.2
2413 Male, age 66, unknown 6.0
1923 Female, age 72, unknown 5.7
1948 Female, age 72, unknown 5.4
1945 Male, age 80, right hemisphere 4.8
1834 Female, age 42, unknown 4.0
Paraventricular nucleus
nTPM: 10.2
2700 Male, age 62, unknown 10.2
Preoptic area
nTPM: 9.4
1907 Male, age 80, right hemisphere 12.2
1861 Female, age 42, unknown 9.3
2414 Female, age 72, unknown 6.9
Supraoptic nucleus
nTPM: 6.4
2835 Female, age 72, unknown 6.9
2043 Male, age 62, unknown 6.8
1894 Female, age 72, unknown 5.6
Ventromedial nucleus
nTPM: 11.7
1822 Female, age 42, unknown 13.6
1982 Female, age 72, unknown 9.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1.9
Samples: 257

Max nTPM: 3.7
Min nTPM: 0.1
Std nTPM: 0.7
Median nTPM: 1.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 3.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 3.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 3.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 3.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 3.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 3.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 3.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 3.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 3.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 3.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 3.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 3.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 3.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 3.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 3.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 3.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 3.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 3.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 3.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 3.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 3.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 3.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 3.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 2.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 2.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 2.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 2.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 2.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 2.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 2.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 2.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 2.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 2.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 2.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 2.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 2.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 2.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 2.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 2.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 2.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 2.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 2.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 2.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 2.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 2.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 2.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 2.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 2.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 2.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 2.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 2.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 2.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 2.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 2.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 2.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 2.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 2.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 2.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 2.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 2.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 2.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 2.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 2.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 2.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 2.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 2.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 2.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 2.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 2.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 2.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 2.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 2.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 2.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 2.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 2.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 2.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 2.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 2.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 2.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 2.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 2.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 2.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 2.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 2.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 2.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 2.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 2.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 2.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 2.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 2.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 2.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 2.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 2.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 2.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 2.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 2.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 2.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 2.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 2.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 2.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 2.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 2.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 2.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 2.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 2.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 2.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 2.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 2.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 2.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 2.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 2.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 2.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 2.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 2.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 2.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 2.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 2.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 2.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 2.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 2.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 2.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 2.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 2.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 2.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 2.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 2.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 1.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 1.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 1.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 1.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 1.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 1.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 1.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 1.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 1.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 1.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 1.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 1.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 1.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 1.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 1.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 1.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 1.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 1.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 1.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 1.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 1.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 1.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 1.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 1.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 1.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 1.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 1.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 1.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 1.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 1.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 1.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 1.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 0.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 0.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 0.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 0.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 0.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 0.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 0.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 0.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 0.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 0.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 0.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 0.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 0.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 0.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 0.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 0.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 0.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 0.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 0.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 0.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 0.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 0.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 0.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 0.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 0.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 0.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 0.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 0.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 0.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 14.9
Samples: 4

Max nTPM: 16.5
Min nTPM: 13.1
Sample A Female 14.8
Sample B Female 15.3
Sample C Male 13.1
Sample D Male 16.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 5.0
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.6
Sample A Male 5.0
Sample B Male 4.6
Sample C Female 5.4
Sample D Female 5.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
70946414 Antisense, RP_050428_01_B05, Mouse strain C57BL/6J (56 days, male) 0.1

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